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    ari-2 ariadne 2 [ Drosophila melanogaster ]

    Gene ID: 37542, updated on 9-May-2012
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    Summary

    Official Symbol
    ari-2provided by Flybase
    Official Full Name
    ariadne 2provided by Flybase
    Primary source
    FLYBASE:FBgn0025186
    Locus tag
    Dmel_CG5709
    Gene type
    protein coding
    RNA name
    ariadne 2
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    ari2; CG5709; Dmel\CG5709; l(2)07768
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    Genomic context

    Location :
    58D1-58D2
    Sequence :
    Chromosome: 2R; NT_033778.3 (18100346..18104769)
    See ari-2 in Epigenomics, MapViewer

    Chromosome 2R - NT_033778.3Genomic Context describing neighboring genes Neighboring gene CG3264 gene product from transcript CG3264-RA Neighboring gene CG11291 gene product from transcript CG11291-RA Neighboring gene CG30278 gene product from transcript CG30278-RA Neighboring gene Organic anion transporting polypeptide 58Da Neighboring gene Organic anion transporting polypeptide 58Db

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Genomic analysis of Drosophila neuronal remodeling: a role for the RNA-binding protein Boule as a negative regulator of axon pruning. Hoopfer ED, et al. J Neurosci, 2008 Jun 11. PMID 18550751.
    2. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    3. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    4. Identification of E2/E3 ubiquitinating enzymes and caspase activity regulating Drosophila sensory neuron dendrite pruning. Kuo CT, et al. Neuron, 2006 Aug 3. PMID 16880123.
    5. Nonsense-mediated mRNA decay factors act in concert to regulate common mRNA targets. Rehwinkel J, et al. RNA, 2005 Oct. PMID 16199763.

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:63159 BioGRID:67555 BG4    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:67510 C15    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:60304 CG13097    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:68440 CG15529    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:59864 CG15631    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:64799 CG17666    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:60459 CG18619    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:57754 CG2865    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:73151 CG30403    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:59834 CG3338    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:59901 CG3792    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:63050 CG4286    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:60503 CG5355    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:62590 CG5522    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:60672 CG6770    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:66874 CG7262    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:63643 CkIIalpha-i3    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:64995 Eip71CD    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:57914 HLH4C    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:61232 Hakai    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:66317 Kap-alpha3    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:64329 Nmt    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:67703 RpS3    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:58951 Traf-like    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:66090 Ubc84D    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:62720 UbcD10    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:58712 Yp3    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:70606 dup    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:58076 dx    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:63592 mri    BioGRID  PubMed Two-hybrid 
    BioGRID:63159 BioGRID:61400 sxc    BioGRID  PubMed Two-hybrid 
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    General gene information

    Markers

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    ubiquitin-protein ligase activity NAS
    Non-traceable Author Statement
    more info
    		  
    zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    cytoplasm NAS
    Non-traceable Author Statement
    more info
    		  
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    General protein information

    Preferred Names
    CG5709 gene product from transcript CG5709-RA
    Names
    CG5709-PA
    ari-2-PA
    ariadne 2
    ariadne-2
    NP_477374.1
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.3

      Range
      18100346..18104769
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_058026.3 → NP_477374.1  ariadne 2 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O76924
      Related
      FBpp0071688, FBtr0071774
      Conserved Domains (2) summary
      smart00647
      Location:222 – 284
      Blast Score: 177
      IBR; In Between Ring fingers
      pfam01485
      Location:222 – 284
      Blast Score: 170
      IBR; IBR domain
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE013599.4 AAF46823.1
    mRNA AJ010169.1 CAA09030.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    O76924.1 GenPept
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    Additional Links

    Gene LinkOut

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