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prkcz.L protein kinase C zeta L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 373768, updated on 11-Apr-2024

Summary

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Official Symbol
prkcz.L
Official Full Name
protein kinase C zeta L homeolog
Primary source
Xenbase:XB-GENE-866379
Locus tag
XELAEV_18035612mg
See related
EnsemblRapid:ENSXLAG00005015465
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
PKMz; TPKC; prkcz; PKCzeta; prkcz-A; pkc-zeta
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Genomic context

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See prkcz.L in Genome Data Viewer
Location:
chromosome: 7L
Exon count:
22
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7L NC_054383.1 (95046099..95164341, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7L NC_030736.1 (85286236..85405395, complement)

Chromosome 7L - NC_054383.1Genomic Context describing neighboring genes Neighboring gene MORN repeat containing 1 L homeolog Neighboring gene SKI proto-oncogene L homeolog Neighboring gene transmembrane protein 26 Neighboring gene gamma-aminobutyric acid (GABA) A receptor, delta L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. PKM zeta restricts dendritic arbor growth by filopodial and branch stabilization within the intact and awake developing brain. Liu XF, et al. J Neurosci, 2009 Sep 30. PMID 19793981, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Protein kinase c activity restricts dendritic arborization during embryonic brain circuit development through synaptotropic stabilization of dynamic processes.
    Title: PKM zeta restricts dendritic arbor growth by filopodial and branch stabilization within the intact and awake developing brain.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables diacylglycerol-dependent serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
protein kinase C zeta type
Names
PKC zeta
protein kinase c type Z

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054383.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    95046099..95164341 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018226006.2 → XP_018081495.1  protein kinase C zeta type isoform X1

    UniProtKB/TrEMBL
    A0A1L8FM28, A0A974CHB5
    Related
    ENSXLAP00005045459.1, ENSXLAT00005046558.1

  2. XM_018226007.2 → XP_018081496.1  protein kinase C zeta type isoform X2

    UniProtKB/TrEMBL
    A0A8J0T912

  3. XM_018226005.2 → XP_018081494.1  protein kinase C zeta type isoform X1

    UniProtKB/TrEMBL
    A0A1L8FM28, A0A974CHB5
    Related
    ENSXLAP00005045479.1, ENSXLAT00005046578.1

  4. XM_041569352.1 → XP_041425286.1  protein kinase C zeta type isoform X5

    UniProtKB/TrEMBL
    A0A8J1L6V4, Q91872
    Conserved Domains (2) summary
    smart00109
    Location:25 → 74
    C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
    cd05617
    Location:129 → 485
    STKc_aPKC_zeta; Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C zeta

  5. XM_041569350.1 → XP_041425284.1  protein kinase C zeta type isoform X3

    UniProtKB/TrEMBL
    A0A8J1L8J0, Q91872
    Conserved Domains (2) summary
    smart00109
    Location:53 → 102
    C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
    cd05617
    Location:157 → 513
    STKc_aPKC_zeta; Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C zeta

  6. XM_041569351.1 → XP_041425285.1  protein kinase C zeta type isoform X4

    UniProtKB/TrEMBL
    A0A8J1L9I4, Q91872
    Conserved Domains (2) summary
    smart00109
    Location:27 → 76
    C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
    cd05617
    Location:131 → 487
    STKc_aPKC_zeta; Catalytic domain of the Serine/Threonine Kinase, Atypical Protein Kinase C zeta
Nucleotide Protein Strain
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