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rps15a ribosomal protein S15a [ Strongylocentrotus purpuratus (purple sea urchin) ]

Gene ID: 373469, updated on 14-Dec-2023

Summary

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Symbol
rps15a
Full Name
ribosomal protein S15a
Primary source
EchinoBase:ECB-GENE-23063964
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Strongylocentrotus purpuratus
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
Also known as
SpS24
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145599.1 (656387..664671, complement)
Build 3.1 previous assembly Spur_3.1 (GCF_000002235.3) Unplaced Scaffold NW_003577188.1 (633461..636163)

NW_022145599.1Genomic Context describing neighboring genes Neighboring gene cell wall protein DAN4-like Neighboring gene Ran GTPase activating protein 1 Neighboring gene uncharacterized LOC753178 Neighboring gene polycomb group protein Pc

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Tissue-restricted accumulation of a ribosomal protein mRNA is not coordinated with rRNA transcription and precedes growth of the sea urchin pluteus larva. Angerer LM, et al. Dev Biol, 1992 Jan. PMID 1728593
  2. Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis. Tu Q, et al. Genome Res, 2012 Oct. PMID 22709795, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
small ribosomal subunit protein uS8; 40S ribosomal protein S15a
Names
ribosomal protein S24
NP_999780.1
XP_011673449.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_214615.2 → NP_999780.1  small ribosomal subunit protein uS8

    See identical proteins and their annotated locations for NP_999780.1

    Status: PROVISIONAL

    Source sequence(s)
    S72597
    UniProtKB/Swiss-Prot
    P33095
    Conserved Domains (1) summary
    PTZ00158
    Location:1 → 130
    PTZ00158; 40S ribosomal protein S15A; Provisional

RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Spur_5.0 Primary Assembly

Genomic

  1. NW_022145599.1 Reference Spur_5.0 Primary Assembly

    Range
    656387..664671 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011675147.2 → XP_011673449.1  40S ribosomal protein S15a isoform X1

    UniProtKB/TrEMBL
    A0A7M7HJB8
    Conserved Domains (1) summary
    PTZ00158
    Location:1 → 130
    PTZ00158; 40S ribosomal protein S15A; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P33095.3 GenPept UniProtKB/Swiss-Prot:P33095

Gene LinkOut

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