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    CG13423 [ Drosophila melanogaster ]

    Gene ID: 37315, updated on 9-May-2012
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    Summary

    Official Symbol
    CG13423provided by Flybase
    Primary source
    FLYBASE:FBgn0034513
    Locus tag
    Dmel_CG13423
    Gene type
    protein coding
    RNA name
    CG13423
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG13423
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    Genomic context

    Location :
    57A5-57A5
    Sequence :
    Chromosome: 2R; NT_033778.3 (16424083..16425769)
    See CG13423 in Epigenomics, MapViewer

    Chromosome 2R - NT_033778.3Genomic Context describing neighboring genes Neighboring gene CG30154 gene product from transcript CG30154-RA Neighboring gene CG18067 gene product from transcript CG18067-RA Neighboring gene CG13427 gene product from transcript CG13427-RA Neighboring gene CG13428 gene product from transcript CG13428-RB

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    2. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    3. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    4. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208.
    5. Heterochromatic sequences in a Drosophila whole-genome shotgun assembly. Hoskins RA, et al. Genome Biol, 2002. PMID 12537574.

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:62970 BioGRID:61397 Atf6    BioGRID  PubMed Two-hybrid 
    BioGRID:62970 BioGRID:58653 Bap60    BioGRID  PubMed Two-hybrid 
    BioGRID:62970 BioGRID:58714 CG10992    BioGRID  PubMed Two-hybrid 
    BioGRID:62970 BioGRID:64680 CG11658    BioGRID  PubMed Two-hybrid 
    BioGRID:62970 BioGRID:57844 CG14270    BioGRID  PubMed Two-hybrid 
    BioGRID:62970 BioGRID:58235 CG1440    BioGRID  PubMed Two-hybrid 
    BioGRID:62970 BioGRID:66523 CG14711    BioGRID  PubMed Two-hybrid 
    BioGRID:62970 BioGRID:59859 CG15634    BioGRID  PubMed Two-hybrid 
    BioGRID:62970 BioGRID:60459 CG18619    BioGRID  PubMed Two-hybrid 
    BioGRID:62970 BioGRID:59491 CG2807    BioGRID  PubMed Two-hybrid 
    BioGRID:62970 BioGRID:68074 CG31324    BioGRID  PubMed Two-hybrid 
    BioGRID:62970 BioGRID:59901 CG3792    BioGRID  PubMed Two-hybrid 
    BioGRID:62970 BioGRID:60452 CG5708    BioGRID  PubMed Two-hybrid 
    BioGRID:62970 BioGRID:60729 CG5792    BioGRID  PubMed Two-hybrid 
    BioGRID:62970 BioGRID:59942 CG7371    BioGRID  PubMed Two-hybrid 
    BioGRID:62970 BioGRID:60757 CG9426    BioGRID  PubMed Two-hybrid 
    BioGRID:62970 BioGRID:68575 CstF-50    BioGRID  PubMed Two-hybrid 
    BioGRID:62970 BioGRID:63230 CycB    BioGRID  PubMed Two-hybrid 
    BioGRID:62970 BioGRID:63886 Hsp83    BioGRID  PubMed Two-hybrid 
    BioGRID:62970 BioGRID:65866 Snr1    BioGRID  PubMed Two-hybrid 
    BioGRID:62970 BioGRID:68781 cas    BioGRID  PubMed Two-hybrid 
    BioGRID:62970 BioGRID:65544 kni    BioGRID  PubMed Two-hybrid 
    BioGRID:62970 BioGRID:63343 l(2)efl    BioGRID  PubMed Two-hybrid 
    BioGRID:62970 BioGRID:69277 nerfin-1    BioGRID  PubMed Two-hybrid 
    BioGRID:62970 BioGRID:65806 tacc    BioGRID  PubMed Two-hybrid 
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    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    cysteine-type endopeptidase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Preferred Names
    CG13423 gene product from transcript CG13423-RA
    Names
    CG13423
    CG13423-PA
    NP_611485.1
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.3

      Range
      16424083..16425769
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_137641.3 → NP_611485.1  CG13423 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1ZBU9
      Related
      FBpp0085535
      Conserved Domains (1) summary
      cl00298
      Location:23 – 472
      Blast Score: 764
      Peptidase_C1; C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase). Papain-like enzymes are mostly endopeptidases with some ...
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE013599.4 AAF57463.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9V935.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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