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    SP2637 [ Drosophila melanogaster ]

    Gene ID: 37147, updated on 8-Jan-2012
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    Summary

    Official Symbol
    SP2637provided by Flybase
    Primary source
    FLYBASE:FBgn0034371
    Locus tag
    Dmel_CG5473
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BEST:GH24992; CG5473; dm-ntan1; Dmel\CG5473
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    Genomic context

    Location :
    55E3-55E5
    Sequence :
    Chromosome: 2R; NT_033778.3 (14528476..14545706, complement)
    See SP2637 in Epigenomics, MapViewer

    Chromosome 2R - NT_033778.3Genomic Context describing neighboring genes Neighboring gene transfer RNA:gly3:55E Neighboring gene CG33724 gene product from transcript CG33724-RA Neighboring gene GDI interacting protein 3 Neighboring gene CG33136 gene product from transcript CG33136-RA

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    2. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    3. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    4. A Drosophila protein-interaction map centered on cell-cycle regulators. Stanyon CA, et al. Genome Biol, 2004. PMID 15575970.
    5. Degradation of DIAP1 by the N-end rule pathway is essential for regulating apoptosis. Ditzel M, et al. Nat Cell Biol, 2003 May. PMID 12692559.

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:62820 BioGRID:67008 Akt1    BioGRID  PubMed Two-hybrid 
    BioGRID:62820 BioGRID:66107 CG11286    BioGRID  PubMed Two-hybrid 
    BioGRID:62820 BioGRID:61339 CG9248    BioGRID  PubMed Two-hybrid 
    BioGRID:62820 BioGRID:64701 CycA    BioGRID  PubMed Two-hybrid 
    BioGRID:62820 BioGRID:68567 CycG    BioGRID  PubMed Two-hybrid 
    BioGRID:62820 BioGRID:65669 CycH    BioGRID  PubMed Two-hybrid 
    BioGRID:62820 BioGRID:63921 CycJ    BioGRID  PubMed Two-hybrid 
    BioGRID:62820 BioGRID:72482 CycK    BioGRID  PubMed Two-hybrid 
    BioGRID:62820 BioGRID:61336 E2f2    BioGRID  PubMed Two-hybrid 
    BioGRID:62820 BioGRID:64739 RhoGAP68F    BioGRID  PubMed Two-hybrid 
    BioGRID:62820 BioGRID:67396 Sirt2    BioGRID  PubMed Two-hybrid 
    BioGRID:62820 BioGRID:67158 ald    BioGRID  PubMed Two-hybrid 
    BioGRID:62820 BioGRID:60206 cdc14    BioGRID  PubMed Two-hybrid 
    BioGRID:62820 BioGRID:68673 nej    BioGRID  PubMed Two-hybrid 
    BioGRID:62820 BioGRID:68973 pie    BioGRID  PubMed Two-hybrid 
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    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    asparaginase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    protein-N-terminal asparagine amidohydrolase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
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    General protein information

    Preferred Names
    CG5473 gene product from transcript CG5473-RC
    Names
    CG5473-PA
    CG5473-PB
    CG5473-PC
    CG5473-PD
    SP2637
    SP2637-PA
    SP2637-PB
    SP2637-PC
    SP2637-PD
    NP_001163199.1
    NP_001163200.1
    NP_611355.2
    NP_725811.1
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.3

      Range
      14528476..14545706, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001169728.1 → NP_001163199.1  SP2637, isoform C [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7KIS4
      Related
      FBpp0291075, FBtr0301861

    2. NM_001169729.1 → NP_001163200.1  SP2637, isoform D [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7KIS4
      Related
      FBpp0291076, FBtr0301862

    3. NM_137511.3 → NP_611355.2  SP2637, isoform A [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MSD1
      Related
      FBpp0085839, FBtr0086657

    4. NM_166300.2 → NP_725811.1  SP2637, isoform B [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MSD1
      Related
      FBpp0085840, FBtr0086658
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    mRNA AF239612.1 AAF63504.1
    genomic AE013599.4 ACZ94472.1
    genomic AE013599.4 ACZ94471.1
    genomic AE013599.4 AAF57658.2
    genomic AE013599.4 AAF57659.2
    mRNA AY118895.1 AAM50755.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    Q7KIS4.1 GenPept
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    Additional Links

    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content