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CG18539 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 37096, updated on 4-Apr-2024

Summary

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Official Symbol
CG18539provided by FlyBase
Primary source
FLYBASE:FBgn0034325
Locus tag
Dmel_CG18539
See related
AllianceGenome:FB:FBgn0034325
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG18539
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Genomic context

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Location:
55C2-55C2; 2-85 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (18297795..18298903)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (14185300..14186408)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene scribbler Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208
  2. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article
  3. Systematic genetic analysis of muscle morphogenesis and function in Drosophila. Schnorrer F, et al. Nature, 2010 Mar 11. PMID 20220848
  4. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
  5. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article

See all (18) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG18539-PB
CG18539-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    18297795..18298903
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001299639.1 → NP_001286568.1  uncharacterized protein Dmel_CG18539, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286568.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0B4LFZ1, E0R919
    Conserved Domains (1) summary
    pfam06477
    Location:26 → 103
    DUF1091; Protein of unknown function (DUF1091)

  2. NM_137471.4 → NP_611315.3  uncharacterized protein Dmel_CG18539, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_611315.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    A1ZB57
    Conserved Domains (1) summary
    pfam06477
    Location:85 → 162
    DUF1091; Protein of unknown function (DUF1091)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0A0B4LFZ1 A0A0B4LFZ1
A1ZB57 A1ZB57

Gene LinkOut

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