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    CG6424 [ Drosophila melanogaster ]

    Gene ID: 37012, updated on 9-May-2012
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    Summary

    Official Symbol
    CG6424provided by Flybase
    Primary source
    FLYBASE:FBgn0028494
    Locus tag
    Dmel_CG6424
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-WO0118547.96; anon-WO0153538.32; anon-WO0153538.33; anon-WO0153538.34; BcDNA:GH05095; Dmel\CG6424; GH05095
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    Genomic context

    Location :
    54E1-54E1
    Sequence :
    Chromosome: 2R; NT_033778.3 (13590840..13606832, complement)
    See CG6424 in Epigenomics, MapViewer

    Chromosome 2R - NT_033778.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene U snoRNA host gene 1 Neighboring gene CG10934 gene product from transcript CG10934-RA Neighboring gene CG10933 gene product from transcript CG10933-RA Neighboring gene Sorting nexin 16

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    2. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    3. The carnegie protein trap library: a versatile tool for Drosophila developmental studies. Buszczak M, et al. Genetics, 2007 Mar. PMID 17194782.
    4. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    5. Protein interaction mapping: a Drosophila case study. Formstecher E, et al. Genome Res, 2005 Mar. PMID 15710747.

    See all (12) citations in PubMed

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:62698 BioGRID:57629 CG14625    BioGRID  PubMed Two-hybrid 
    BioGRID:62698 BioGRID:60196 CG7196    BioGRID  PubMed Two-hybrid 
    BioGRID:62698 BioGRID:61540 Eaf    BioGRID  PubMed Two-hybrid 
    BioGRID:62698 BioGRID:57700 Edem1    BioGRID  PubMed Two-hybrid 
    BioGRID:62698 BioGRID:64372 exo70    BioGRID  PubMed Two-hybrid 
    BioGRID:62698 BioGRID:68196 wdb    BioGRID  PubMed Two-hybrid 
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    General gene information

    Markers

    Homology

    Pathways from BioSystems

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    General protein information

    Preferred Names
    CG6424 gene product from transcript CG6424-RA
    Names
    CG6424
    CG6424-PA
    CG6424-PB
    CG6424-PC
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.3

      Range
      13590840..13606832, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_166246.2 → NP_725709.1  CG6424, isoform A [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0E938
      Related
      FBpp0086046, FBtr0086886

    2. NM_137405.3 → NP_611249.2  CG6424, isoform B [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0E938
      Related
      FBpp0086047, FBtr0086887

    3. NM_001169710.1 → NP_001163181.1  CG6424, isoform C [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0E938
      Related
      FBpp0290420, FBtr0301202
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE013599.4 AAM68485.1
    genomic AE013599.4 AAF57810.2
    genomic AE013599.4 ACZ94453.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9V866.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content