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    CG7997 [ Drosophila melanogaster ]

    Gene ID: 36829, updated on 19-May-2012
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    Summary

    Official Symbol
    CG7997provided by Flybase
    Primary source
    FLYBASE:FBgn0034117
    Locus tag
    Dmel_CG7997
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CT24026; Dmel\CG7997
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    Genomic context

    Location :
    53C1-53C1
    Sequence :
    Chromosome: 2R; NT_033778.3 (12228756..12231684, complement)
    See CG7997 in Epigenomics, MapViewer

    Chromosome 2R - NT_033778.3Genomic Context describing neighboring genes Neighboring gene CG4282 gene product from transcript CG4282-RA Neighboring gene Vacuolar H[+] ATPase 44kD C subunit Neighboring gene HMG Coenzyme A synthase Neighboring gene Nucleoporin 62 Neighboring gene wicked

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. A protein complex network of Drosophila melanogaster. Guruharsha KG, et al. Cell, 2011 Oct 28. PMID 22036573.
    2. GlycoFly: a database of Drosophila N-linked glycoproteins identified using SPEG--MS techniques. Baycin-Hizal D, et al. J Proteome Res, 2011 Jun 3. PMID 21480662.
    3. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    4. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    5. GATAe-dependent and -independent expressions of genes in the differentiated endodermal midgut of Drosophila. Okumura T, et al. Gene Expr Patterns, 2007 Jan. PMID 16914392.

    See all (15) citations in PubMed

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:62545 BioGRID:67510 C15    BioGRID  PubMed Two-hybrid 
    BioGRID:62545 BioGRID:65837 CG2604    BioGRID  PubMed Two-hybrid 
    BioGRID:62545 BioGRID:60518 CG6206    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:62545 BioGRID:63754 CG7995    BioGRID  PubMed Two-hybrid 
    BioGRID:62545 BioGRID:60787 CG9293    BioGRID  PubMed Two-hybrid 
    BioGRID:62545 BioGRID:59308 CG9576    BioGRID  PubMed Two-hybrid 
    BioGRID:62545 BioGRID:64923 CG9628    BioGRID  PubMed Two-hybrid 
    BioGRID:62545 BioGRID:61232 Hakai    BioGRID  PubMed Two-hybrid 
    BioGRID:62545 BioGRID:62161 spt4    BioGRID  PubMed Two-hybrid 
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    General gene information

    Homology

    • Homologs of the CG7997 gene: The CG7997 gene is conserved in human, chimpanzee, , dog, cow, mouse, rat, chicken, zebrafish, mosquito, A.thaliana, and rice.

    Pathways from BioSystems

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    alpha-galactosidase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    cation binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Preferred Names
    CG7997 gene product from transcript CG7997-RB
    Names
    CG7997
    CG7997-PA
    CG7997-PB
    NP_611119.1
    NP_725571.1
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.3

      Range
      12228756..12231684, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_166170.2 → NP_725571.1  CG7997, isoform B [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K127
      Related
      FBpp0086315
      Conserved Domains (1) summary
      cl11402
      Location:25 – 415
      Blast Score: 669
      GH31; The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, ...

    2. NM_137275.3 → NP_611119.1  CG7997, isoform A [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K127
      Related
      FBpp0086316
      Conserved Domains (1) summary
      cl11402
      Location:25 – 415
      Blast Score: 669
      GH31; The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, ...
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE013599.4 AAF58008.2
    genomic AE013599.4 AAM68519.1
    mRNA AY069427.1 AAL39572.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9V7N9.1 GenPept
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    Additional Links

    Gene LinkOut

      Supplemental Content