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    CG8435 [ Drosophila melanogaster ]

    Gene ID: 36789, updated on 9-May-2012
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    Summary

    Official Symbol
    CG8435provided by Flybase
    Primary source
    FLYBASE:FBgn0034084
    Locus tag
    Dmel_CG8435
    Gene type
    protein coding
    RNA name
    CG8435
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG8435
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    Genomic context

    Location :
    52F3-52F3
    Sequence :
    Chromosome: 2R; NT_033778.3 (12057105..12058365, complement)
    See CG8435 in Epigenomics, MapViewer

    Chromosome 2R - NT_033778.3Genomic Context describing neighboring genes Neighboring gene Cysteinyl-tRNA synthetase Neighboring gene CG10731 gene product from transcript CG10731-RA Neighboring gene lambik Neighboring gene CG10734 gene product from transcript CG10734-RA Neighboring gene CG18243 gene product from transcript CG18243-RB Neighboring gene Lissencephaly-1

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    2. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    3. Systematic identification of functional orthologs based on protein network comparison. Bandyopadhyay S, et al. Genome Res, 2006 Mar. PMID 16510899.
    4. A genome-wide RNA interference screen in Drosophila melanogaster cells for new components of the Hh signaling pathway. Nybakken K, et al. Nat Genet, 2005 Dec. PMID 16311596.
    5. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.

    See all (11) citations in PubMed

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:62509 BioGRID:61040 CG15141    BioGRID  PubMed Two-hybrid 
    BioGRID:62509 BioGRID:62692 CG6459    BioGRID  PubMed Two-hybrid 
    BioGRID:62509 BioGRID:64175 CG8219    BioGRID  PubMed Two-hybrid 
    BioGRID:62509 BioGRID:60757 CG9426    BioGRID  PubMed Two-hybrid 
    BioGRID:62509 BioGRID:58951 Traf-like    BioGRID  PubMed Two-hybrid 
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    General gene information

    Homology

    • Homologs of the CG8435 gene: The CG8435 gene is conserved in human, chimpanzee, , dog, cow, mouse, chicken, zebrafish, mosquito, S.pombe, , N.crassa, A.thaliana, and rice.

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    neurogenesis IMP
    Inferred from Mutant Phenotype
    more info
    		  
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    General protein information

    Preferred Names
    CG8435 gene product from transcript CG8435-RA
    Names
    CG8435
    CG8435-PA
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.3

      Range
      12057105..12058365, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_137248.3 → NP_611092.2  CG8435 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7JVH0
      Related
      FBpp0086387, FBtr0087249
      Conserved Domains (2) summary
      COG5134
      Location:7 – 108
      Blast Score: 241
      COG5134; Uncharacterized conserved protein [Function unknown]
      pfam04502
      Location:1 – 228
      Blast Score: 741
      DUF572; Family of unknown function (DUF572)
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE013599.4 AAF58052.2
    mRNA AY118949.1 AAM50809.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9V7J9.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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