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rplE 50S ribosomal protein L5 [ Thiobacillus denitrificans ATCC 25259 ]

Gene ID: 3671684, updated on 12-Apr-2014
Gene symbol
rplE
Gene description
50S ribosomal protein L5
Locus tag
Tbd_0417
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Thiobacillus denitrificans ATCC 25259 (strain: ATCC 25259)
Lineage
Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus
Sequence:
NC_007404.1 (443144..443683)

NC_007404.1Genomic Context describing neighboring genes Neighboring gene 50S ribosomal protein L14 Neighboring gene 50S ribosomal protein L24 Neighboring gene 30S ribosomal protein S14 Neighboring gene 30S ribosomal protein S8

Names
50S ribosomal protein L5
YP_314175.1
  • part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007404.1 

    Range
    443144..443683
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_314175.1 50S ribosomal protein L5 [Thiobacillus denitrificans ATCC 25259]

    See proteins identical to YP_314175.1

    Status: VALIDATED

    UniProtKB/Swiss-Prot
    Q3SLN7
    Conserved Domains (3) summary
    pfam00281
    Location:2480
    Blast Score: 195
    Ribosomal_L5; Ribosomal protein L5
    PRK00010
    Location:1179
    Blast Score: 963
    rplE; 50S ribosomal protein L5; Validated
    pfam00673
    Location:84178
    Blast Score: 461
    Ribosomal_L5_C; ribosomal L5P family C-terminus