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    CG8079 [ Drosophila melanogaster ]

    Gene ID: 36689, updated on 9-May-2012
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    Summary

    Official Symbol
    CG8079provided by Flybase
    Primary source
    FLYBASE:FBgn0034002
    Locus tag
    Dmel_CG8079
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG8079
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    Genomic context

    Location :
    51E7-51E7
    Sequence :
    Chromosome: 2R; NT_033778.3 (11105886..11111329)
    See CG8079 in Epigenomics, MapViewer

    Chromosome 2R - NT_033778.3Genomic Context describing neighboring genes Neighboring gene CG8093 gene product from transcript CG8093-RA Neighboring gene CG11808 gene product from transcript CG11808-RA Neighboring gene mitochondrial ribosomal protein L41 Neighboring gene Hexokinase C Neighboring gene Follistatin Neighboring gene scab Neighboring gene CG16827 gene product from transcript CG16827-RA Neighboring gene CG34123 gene product from transcript CG34123-RG

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. A protein complex network of Drosophila melanogaster. Guruharsha KG, et al. Cell, 2011 Oct 28. PMID 22036573.
    2. Conservation of the protein composition and electron microscopy structure of Drosophila melanogaster and human spliceosomal complexes. Herold N, et al. Mol Cell Biol, 2009 Jan. PMID 18981222.
    3. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    4. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    5. Computational identification of Ftz/Ftz-F1 downstream target genes. Bowler T, et al. Dev Biol, 2006 Nov 1. PMID 16996052.

    See all (13) citations in PubMed

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:62428 BioGRID:66085 CG1142    BioGRID  PubMed Two-hybrid 
    BioGRID:62428 BioGRID:64711 CG14126    BioGRID  PubMed Two-hybrid 
    BioGRID:62428 BioGRID:58890 CG15914    BioGRID  PubMed Two-hybrid 
    BioGRID:62428 BioGRID:66258 CG18005    BioGRID  PubMed Two-hybrid 
    BioGRID:62428 BioGRID:57912 CG3081    BioGRID  PubMed Two-hybrid 
    BioGRID:62428 BioGRID:64303 CG32369    BioGRID  PubMed Two-hybrid 
    BioGRID:62428 BioGRID:67594 CG34376    BioGRID  PubMed Two-hybrid 
    BioGRID:62428 BioGRID:64643 CG6175    BioGRID  PubMed Two-hybrid 
    BioGRID:62428 BioGRID:65440 CG7757    BioGRID  PubMed Two-hybrid 
    BioGRID:62428 BioGRID:60264 CG7818    BioGRID  PubMed Two-hybrid 
    BioGRID:62428 BioGRID:68389 CG7824    BioGRID  PubMed Two-hybrid 
    BioGRID:62428 BioGRID:59568 Cdlc2    BioGRID  PubMed Two-hybrid 
    BioGRID:62428 BioGRID:60504 Klp31E    BioGRID  PubMed Two-hybrid 
    BioGRID:62428 BioGRID:60502 RpS27A    BioGRID  PubMed Two-hybrid 
    BioGRID:62428 BioGRID:60899 Su(H)    BioGRID  PubMed Two-hybrid 
    BioGRID:62428 BioGRID:68605 ci    BioGRID  PubMed Two-hybrid 
    BioGRID:62428 BioGRID:57920 ctp    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:62428 BioGRID:60919 esg    BioGRID  PubMed Two-hybrid 
    BioGRID:62428 BioGRID:61462 geminin    BioGRID  PubMed Two-hybrid 
    BioGRID:62428 BioGRID:63919 sty    BioGRID  PubMed Two-hybrid 
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    General gene information

    Homology

    • Homologs of the CG8079 gene: The CG8079 gene is conserved in human, chimpanzee, , dog, cow, mouse, rat, chicken, zebrafish, mosquito, and C.elegans.

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    nuclear mRNA splicing, via spliceosome IC
    Inferred by Curator
    more info
    		 PubMed 
    Component Evidence Code Pubs
    precatalytic spliceosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
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    General protein information

    Preferred Names
    CG8079 gene product from transcript CG8079-RA
    Names
    CG8079
    CG8079-PA
    CG8079-PB
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.3

      Range
      11105886..11111329
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_137179.2 → NP_611023.1  CG8079, isoform A [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K0W0
      Related
      FBpp0086500, FBtr0087368
      Conserved Domains (2) summary
      cd00060
      Location:346 – 416
      Blast Score: 135
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      cl02611
      Location:517 – 562
      Blast Score: 115
      G-patch; G-patch domain

    2. NM_166082.1 → NP_725443.1  CG8079, isoform B [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1Z9Z1
      Related
      FBpp0086499, FBtr0087367
      Conserved Domains (2) summary
      cd00060
      Location:344 – 414
      Blast Score: 135
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      cl02611
      Location:515 – 560
      Blast Score: 115
      G-patch; G-patch domain
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE013599.4 AAF58159.1
    mRNA AY069548.1 AAL39693.1
    genomic AE013599.4 AAM68526.1
    mRNA BT125870.1 ADU79258.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9V7A0.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content