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    phyl phyllopod [ Drosophila melanogaster ]

    Gene ID: 36606, updated on 10-May-2012
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    Summary

    Official Symbol
    phylprovided by Flybase
    Official Full Name
    phyllopodprovided by Flybase
    Primary source
    FLYBASE:FBgn0013725
    Locus tag
    Dmel_CG10108
    Gene type
    protein coding
    RNA name
    phyllopod
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG10108; D(DmcycE[JP])2.2; Dmel\CG10108; Phyl; PHYL; SR2-3; Su(Raf)2C
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    Genomic context

    Location :
    51A2-51A2
    Sequence :
    Chromosome: 2R; NT_033778.3 (10314841..10319840, complement)
    See phyl in Epigenomics, MapViewer

    Chromosome 2R - NT_033778.3Genomic Context describing neighboring genes Neighboring gene SAPK-interacting protein 1 Neighboring gene CG17386 gene product from transcript CG17386-RA Neighboring gene O/E-associated zinc finger protein Neighboring gene Lobe

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Robust target gene discovery through transcriptome perturbations and genome-wide enhancer predictions in Drosophila uncovers a regulatory basis for sensory specification. Aerts S, et al. PLoS Biol, 2010 Jul 27. PMID 20668662.
    2. Regulation of lifespan, metabolism, and stress responses by the Drosophila SH2B protein, Lnk. Slack C, et al. PLoS Genet, 2010 Mar 19. PMID 20333234.
    3. Laser microdissection of sensory organ precursor cells of Drosophila microchaetes. Buffin E, et al. PLoS One, 2010 Feb 19. PMID 20174573.
    4. Wing defects in Drosophila xenicid mutant clones are caused by C-terminal deletion of additional sex combs (Asx). Bischoff K, et al. PLoS One, 2009 Dec 1. PMID 19956620.
    5. Genetic and proteomic evidence for roles of Drosophila SUMO in cell cycle control, Ras signaling, and early pattern formation. Nie M, et al. PLoS One, 2009 Jun 16. PMID 19529778.

    See all (65) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    1. Notch and Wingless signalling are regulated by phyllopod, a transcriptional target of the EGFR pathway
      Title: Regulation of Notch and Wingless signalling by phyllopod, a transcriptional target of the EGFR pathway.
    2. Negative feedback regulation of phyl controls the timing of neural precursor division.
      Title: Negative-feedback regulation of proneural proteins controls the timing of neural precursor division.
    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:62356 BioGRID:61887 14-3-3zeta    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:66041 CG1104    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:63867 CG11486    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:61662 CG11635    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:58352 CG1354    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:57737 CG14053    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:66460 CG14696    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:58203 CG2116    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:58024 CG3726    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:58064 CG3847    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:58345 CG42797    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:62543 CG4282    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:60729 CG5792    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:60168 CG5973    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:64521 CG6767    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:66687 CG7518    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:66319 CG8301    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:59908 Cg25C    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:68127 Ets97D    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:65444 Grasp65    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:77146 His2A:CG31618    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:63886 Hsp83    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:61885 Jra    BioGRID  PubMed Phenotypic Suppression 
    BioGRID:62356 BioGRID:67779 Mta70    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:57823 N    BioGRID  PubMed Phenotypic Suppression 
    BioGRID:62356 BioGRID:58925 Pros28.1    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:67472 Rab11    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:66301 Ras85D    BioGRID  PubMed Phenotypic Enhancement; Phenotypic Suppression 
    BioGRID:62356 BioGRID:67703 RpS3    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:203231 Siah1a    BioGRID  PubMed Reconstituted Complex 
    BioGRID:62356 BioGRID:62900 betaTub56D    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:59468 ebi    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:62356 BioGRID:64252 eco    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:62647 l(2)k01209    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:59717 lilli    BioGRID  PubMed Phenotypic Suppression 
    BioGRID:62356 BioGRID:63711 pUf68    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:57758 phl    BioGRID  PubMed Phenotypic Enhancement 
    BioGRID:62356 BioGRID:58454 sev    BioGRID  PubMed Phenotypic Suppression 
    BioGRID:62356 BioGRID:65183 sina    BioGRID  PubMed Phenotypic Enhancement; Phenotypic Suppression; Reconstituted Complex; Two-hybrid 
    BioGRID:62356 BioGRID:65184 sinah    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:66603 svp    BioGRID  PubMed Phenotypic Suppression 
    BioGRID:62356 BioGRID:63443 tamo    BioGRID  PubMed Two-hybrid 
    BioGRID:62356 BioGRID:71315 ttk    BioGRID  PubMed Phenotypic Enhancement; Phenotypic Suppression; Two-hybrid 
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    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    binding, bridging IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    protein binding, bridging IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    protein self-association IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    R1/R6 cell fate commitment IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    R1/R6 cell fate commitment IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    R7 cell development TAS
    Traceable Author Statement
    more info
    		 PubMed 
    R7 cell fate commitment IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    R7 cell fate commitment IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Ras protein signal transduction IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    compound eye photoreceptor cell differentiation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    lateral inhibition IMP
    Inferred from Mutant Phenotype
    more info
    		  
    peripheral nervous system development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    proteasomal protein catabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    regulation of Notch signaling pathway IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    regulation of Wnt receptor signaling pathway IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    sensory organ boundary specification IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    sensory organ precursor cell fate determination IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    ubiquitin ligase complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
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    General protein information

    Preferred Names
    CG10108 gene product from transcript CG10108-RA
    Names
    CG10108-PA
    phyl-PA
    phyllopod
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.3

      Range
      10314841..10319840, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_166055.1 → NP_725394.1  phyllopod [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q27934
      Related
      FBpp0086645, FBtr0087516
      Conserved Domains (1) summary
      cl07874
      Location:28 – 91
      Blast Score: 115
      zf-AD; Zinc-finger associated domain (zf-AD)
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic U19731.1 AAB60231.1
    genomic AE013599.4 AAF58245.1
    mRNA AY075531.1 AAL68338.1
    mRNA BT072878.1 ACN67102.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q27934.2 GenPept
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    Additional Links

    Gene LinkOut

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