U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CG6701 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 36550, updated on 4-Apr-2024

Summary

Go to the top of the page Help
Official Symbol
CG6701provided by FlyBase
Primary source
FLYBASE:FBgn0033889
Locus tag
Dmel_CG6701
See related
AllianceGenome:FB:FBgn0033889
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG6701; EP(2)2054; EP2054
Summary
Predicted to enable 5'-3' RNA helicase activity and RNA binding activity. Involved in dendrite morphogenesis. Predicted to be active in P granule and cytosol. Is expressed in adult head. [provided by Alliance of Genome Resources, Apr 2022]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
50C22-50C23; 2-68 cM
Exon count:
11
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (13972984..13980165, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (9860489..9867670, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Sulfotransferase 4 Neighboring gene uncharacterized protein Neighboring gene Chromosome transmission fidelity 4 Neighboring gene uncharacterized protein Neighboring gene Related to the N terminus of tre oncogene

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Prevalence of off-target effects in Drosophila RNA interference screens. Ma Y, et al. Nature, 2006 Sep 21. PMID 16964239
  2. A screen for modifiers of RacGAP(84C) gain-of-function in the Drosophila eye revealed the LIM kinase Cdi/TESK1 as a downstream effector of Rac1 during spermatogenesis. Raymond K, et al. J Cell Sci, 2004 Jun 1. PMID 15169836
  3. FACS purification and transcriptome analysis of drosophila neural stem cells reveals a role for Klumpfuss in self-renewal. Berger C, et al. Cell Rep, 2012 Aug 30. PMID 22884370, Free PMC Article
  4. An overexpression screen in Drosophila for genes that restrict growth or cell-cycle progression in the developing eye. Tseng AS, et al. Genetics, 2002 Sep. PMID 12242236, Free PMC Article
  5. Variation in the response to exercise stimulation in Drosophila: marathon runner versus sprinter genotypes. Riddle NC. J Exp Biol, 2020 Sep 21. PMID 32737212

See all (38) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables 5'-3' RNA helicase activity IEA
Inferred from Electronic Annotation
more info
  
enables 5'-3' RNA helicase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables RNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  
enables helicase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in dendrite morphogenesis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in regulatory ncRNA-mediated post-transcriptional gene silencing IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in P granule IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein
Names
CG6701-PB
CG6701-PC
CG6701-PD
CG6701-PE

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    13972984..13980165 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_137076.3 → NP_610920.3  uncharacterized protein Dmel_CG6701, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_610920.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    A1Z9K0, C3KKC8
    Conserved Domains (3) summary
    TIGR00376
    Location:424 → 1037
    TIGR00376; DNA helicase, putative
    pfam13087
    Location:812 → 1019
    AAA_12; AAA domain
    pfam13245
    Location:618 → 687
    AAA_19; Part of AAA domain

  2. NM_001201995.2 → NP_001188924.1  uncharacterized protein Dmel_CG6701, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001188924.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A1Z9K0, C3KKC8
    Conserved Domains (3) summary
    TIGR00376
    Location:424 → 1037
    TIGR00376; DNA helicase, putative
    pfam13087
    Location:812 → 1019
    AAA_12; AAA domain
    pfam13245
    Location:618 → 687
    AAA_19; Part of AAA domain

  3. NM_001299471.1 → NP_001286400.1  uncharacterized protein Dmel_CG6701, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286400.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A1Z9K0, C3KKC8
    Conserved Domains (3) summary
    TIGR00376
    Location:424 → 1037
    TIGR00376; DNA helicase, putative
    pfam13087
    Location:812 → 1019
    AAA_12; AAA domain
    pfam13245
    Location:618 → 687
    AAA_19; Part of AAA domain

  4. NM_001201994.2 → NP_001188923.1  uncharacterized protein Dmel_CG6701, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001188923.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A1Z9K0, C3KKC8
    Conserved Domains (3) summary
    TIGR00376
    Location:424 → 1037
    TIGR00376; DNA helicase, putative
    pfam13087
    Location:812 → 1019
    AAA_12; AAA domain
    pfam13245
    Location:618 → 687
    AAA_19; Part of AAA domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A1Z9K0 A1Z9K0
Q8MQQ9 Q8MQQ9

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases
Research Materials
Tools
Miscellaneous