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CDC9 DNA ligase [ Candida albicans SC5314 ]

Gene ID: 3647757, updated on 12-Apr-2014
Gene symbol
CDC9
Gene description
DNA ligase
Locus tag
CaO19.6155
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Candida albicans SC5314 (strain: SC5314)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; mitosporic Saccharomycetales; Candida
Location:
chromosome: R
Exon count :
1

NW_139671.1Genomic Context describing neighboring genes Neighboring gene C terminal fragment of nonallelic CaP19.1289, similar to S. cerevisiae SCT1 (YBL011W) glycerol-3-phosphate acyltransferase, aka GAT2; possible overlap of contigs 19-1739 and 19-2401 Neighboring gene similar to S. cerevisiae YER093C-A Neighboring gene hypothetical protein Neighboring gene low complexity orf, weak similarity to bacterial M proteins that bind IgA

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Base excision repair, organism-specific biosystem (from KEGG)
    Base excision repair, organism-specific biosystemBase excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair ...
  • Base excision repair, conserved biosystem (from KEGG)
    Base excision repair, conserved biosystemBase excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair ...
  • DNA replication, organism-specific biosystem (from KEGG)
    DNA replication, organism-specific biosystemA complex network of interacting proteins and enzymes is required for DNA replication. Generally, DNA replication follows a multistep enzymatic pathway. At the DNA replication fork, a DNA helicase (D...
  • DNA replication, conserved biosystem (from KEGG)
    DNA replication, conserved biosystemA complex network of interacting proteins and enzymes is required for DNA replication. Generally, DNA replication follows a multistep enzymatic pathway. At the DNA replication fork, a DNA helicase (D...
  • Mismatch repair, organism-specific biosystem (from KEGG)
    Mismatch repair, organism-specific biosystemDNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preven...
  • Mismatch repair, conserved biosystem (from KEGG)
    Mismatch repair, conserved biosystemDNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preven...
  • Nucleotide excision repair, organism-specific biosystem (from KEGG)
    Nucleotide excision repair, organism-specific biosystemNucleotide excision repair (NER) is a mechanism to recognize and repair bulky DNA damage caused by compounds, environmental carcinogens, and exposure to UV-light. In humans hereditary defects in the ...
  • Nucleotide excision repair, conserved biosystem (from KEGG)
    Nucleotide excision repair, conserved biosystemNucleotide excision repair (NER) is a mechanism to recognize and repair bulky DNA damage caused by compounds, environmental carcinogens, and exposure to UV-light. In humans hereditary defects in the ...
Preferred Names
DNA ligase
Names
hypothetical protein

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_139671.1 

    Range
    1013..3325
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_705545.1XP_710637.1  hypothetical protein CaO19.6155 [Candida albicans SC5314]

    See proteins identical to XP_710637.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q59LP7
    Conserved Domains (4) summary
    cd07969
    Location:618764
    Blast Score: 586
    OBF_DNA_ligase_I; The Oligonucleotide/oligosaccharide binding (OB)-fold domain of ATP-dependent DNA ligase I is a DNA-binding module that is part of the catalytic core unit
    cd07900
    Location:392613
    Blast Score: 982
    Adenylation_DNA_ligase_I_Euk; Adenylation domain of eukaryotic DNA Ligase I
    PLN03113
    Location:22767
    Blast Score: 1598
    PLN03113; DNA ligase 1; Provisional
    pfam04675
    Location:157339
    Blast Score: 485
    DNA_ligase_A_N; DNA ligase N terminus

Supplemental Content

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