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    Obp49a Odorant-binding protein 49a [ Drosophila melanogaster ]

    Gene ID: 36399, updated on 10-May-2012
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    Summary

    Official Symbol
    Obp49aprovided by Flybase
    Official Full Name
    Odorant-binding protein 49aprovided by Flybase
    Primary source
    FLYBASE:FBgn0050052
    Locus tag
    Dmel_CG30052
    Gene type
    protein coding
    RNA name
    Odorant-binding protein 49a
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:GH25962; CG30052; CG8769; Dmel\CG30052
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    Genomic context

    Location :
    49B12-49B12
    Sequence :
    Chromosome: 2R; NT_033778.3 (8577564..8578460, complement)
    See Obp49a in Epigenomics, MapViewer

    Chromosome 2R - NT_033778.3Genomic Context describing neighboring genes Neighboring gene CG8771 gene product from transcript CG8771-RB Neighboring gene CG13148 gene product from transcript CG13148-RA Neighboring gene CG30053 gene product from transcript CG30053-RA Neighboring gene CG8768 gene product from transcript CG8768-RA Neighboring gene Wake-up-call

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Comparative genomics of the odorant-binding and chemosensory protein gene families across the Arthropoda: origin and evolutionary history of the chemosensory system. Vieira FG, et al. Genome Biol Evol, 2011. PMID 21527792.
    2. Plasticity of the chemoreceptor repertoire in Drosophila melanogaster. Zhou S, et al. PLoS Genet, 2009 Oct. PMID 19816562.
    3. Regulatory divergence in Drosophila melanogaster and D. simulans, a genomewide analysis of allele-specific expression. Graze RM, et al. Genetics, 2009 Oct. PMID 19667135.
    4. Phenotypic plasticity and genotype by environment interaction for olfactory behavior in Drosophila melanogaster. Sambandan D, et al. Genetics, 2008 Jun. PMID 18505870.
    5. Comparative genomic analysis of the odorant-binding protein family in 12 Drosophila genomes: purifying selection and birth-and-death evolution. Vieira FG, et al. Genome Biol, 2007. PMID 18039354.

    See all (16) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:62172 BioGRID:68440 CG15529    BioGRID  PubMed Two-hybrid 
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    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    odorant binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    odorant binding ISA
    Inferred from Sequence Alignment
    more info
    		 PubMed 
    Process Evidence Code Pubs
    sensory perception of chemical stimulus ISA
    Inferred from Sequence Alignment
    more info
    		 PubMed 
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
    		  
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    General protein information

    Preferred Names
    CG30052 gene product from transcript CG30052-RA
    Names
    CG30052-PA
    Obp49a-PA
    Odorant-binding protein 49a
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.3

      Range
      8577564..8578460, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_136968.2 → NP_610812.1  Odorant-binding protein 49a [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7JVM1
      Related
      FBpp0086985, FBtr0087872
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE013599.4 AAF58469.2
    mRNA AY118821.1 AAM50681.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9V6F8.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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