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    Cpr47Ef Cuticular protein 47Ef [ Drosophila melanogaster ]

    Gene ID: 36194, updated on 10-May-2012
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    Summary

    Official Symbol
    Cpr47Efprovided by Flybase
    Official Full Name
    Cuticular protein 47Efprovided by Flybase
    Primary source
    FLYBASE:FBgn0033603
    Locus tag
    Dmel_CG13214
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG13214; DmelCpr47Ef; Dmel\CG13214
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    Genomic context

    Location :
    47E4-47E5
    Sequence :
    Chromosome: 2R; NT_033778.3 (7154420..7160019, complement)
    See Cpr47Ef in Epigenomics, MapViewer

    Chromosome 2R - NT_033778.3Genomic Context describing neighboring genes Neighboring gene Cuticular protein 47Ed Neighboring gene Cuticular protein 47Ee Neighboring gene Troponin C at 47D Neighboring gene Cuticular protein 47Eg

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. The transcriptional diversity of 25 Drosophila cell lines. Cherbas L, et al. Genome Res, 2011 Feb. PMID 21177962.
    2. Protein crosslinking by transglutaminase controls cuticle morphogenesis in Drosophila. Shibata T, et al. PLoS One, 2010 Oct 18. PMID 20976106.
    3. Extensive gene amplification and concerted evolution within the CPR family of cuticular proteins in mosquitoes. Cornman RS, et al. Insect Biochem Mol Biol, 2008 Jun. PMID 18510978.
    4. Drosophila cuticular proteins with the R&R Consensus: annotation and classification with a new tool for discriminating RR-1 and RR-2 sequences. Karouzou MV, et al. Insect Biochem Mol Biol, 2007 Aug. PMID 17628275.
    5. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:61990 BioGRID:71866 Atpalpha    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:64806 CG10948    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:68311 CG11880    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:65864 CG12162    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:62132 CG13157    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:65947 CG15580    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:61850 CG1675    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:77006 CG31373    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:64521 CG6767    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:63550 CG9083    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:58597 Cpr11A    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:62954 Cpr56F    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:59591 Eno    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:58893 Gapdh2    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:65674 P5CDh1    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:61868 TER94    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:59836 Tps1    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:60212 TwdlE    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:60833 cenG1A    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:69540 deltaCOP    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:65901 elm    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:64892 endos    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:62994 exu    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:69950 ix    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:61489 koi    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:64116 mad2    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:64498 path    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:58531 prtp    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:64836 trn    BioGRID  PubMed Two-hybrid 
    BioGRID:61990 BioGRID:61306 vari    BioGRID  PubMed Two-hybrid 
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    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    structural constituent of chitin-based cuticle ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    structural constituent of chitin-based larval cuticle ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
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    General protein information

    Preferred Names
    CG13214 gene product from transcript CG13214-RD
    Names
    CG13214-PC
    CG13214-PD
    Cpr47Ef-PC
    Cpr47Ef-PD
    cuticular protein 47Ef
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.3

      Range
      7154420..7160019, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001201976.1 → NP_001188905.1  cuticular protein 47Ef, isoform D [Drosophila melanogaster]

      Status: REVIEWED

      Conserved Domains (1) summary
      pfam00379
      Location:149 – 204
      Blast Score: 160
      Chitin_bind_4; Insect cuticle protein

    2. NM_136816.2 → NP_610660.2  cuticular protein 47Ef, isoform C [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1Z8H7
      Conserved Domains (1) summary
      pfam00379
      Location:149 – 204
      Blast Score: 160
      Chitin_bind_4; Insect cuticle protein
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE013599.4 ADV37152.1
    genomic AE013599.4 AAF58688.2
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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