These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
Genomic
-
NG_029220.1 RefSeqGene
- Range
- 5001..43159
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001137673.1 → NP_001131145.1 interleukin enhancer-binding factor 3 isoform e
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) differs in the 3' UTR and coding region compared to variant 4. The resulting isoform (e) has a distinct C-terminus compared to isoform d.
- Source sequence(s)
-
AC011475, AW576353, BC064836, DC320902
- Consensus CDS
-
CCDS45967.1
- UniProtKB/Swiss-Prot
-
Q12906
- Related
- ENSP00000384660, ENST00000407004
- Conserved Domains (2) summary
-
- cd00048
Location:402 – 465
Blast Score: 140
- DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...
- cl02675
Location:88 – 342
Blast Score: 947
- DZF; DZF domain
-
NM_004516.3 → NP_004507.2 interleukin enhancer-binding factor 3 isoform b
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 3' UTR and coding region compared to variant 4. The resulting isoform (b) has a distinct C-terminus compared to isoform d. This isoform is also called NFAR-1 or DRBP76.
- Source sequence(s)
-
AJ271745, AJ271747, AW576353, DC320902, X98264
- Consensus CDS
-
CCDS12247.1
- UniProtKB/Swiss-Prot
-
Q12906
- Related
- ENSP00000250241, ENST00000250241
- Conserved Domains (2) summary
-
- cd00048
Location:402 – 465
Blast Score: 140
- DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...
- cl02675
Location:88 – 342
Blast Score: 946
- DZF; DZF domain
-
NM_012218.3 → NP_036350.2 interleukin enhancer-binding factor 3 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) uses an alternate splice site in the 3' coding region compared to variant 4. The resulting isoform (a) has a shorter C-terminus compared to isoform d. This isoform is also called NFAR-2, ILF3-E and NF110.
- Source sequence(s)
-
AF167570, AJ271747, BC018633, DC320902, X98264
- Consensus CDS
-
CCDS12246.1
- UniProtKB/Swiss-Prot
-
Q12906
- Related
- ENSP00000315205, ENST00000318511
- Conserved Domains (2) summary
-
- cd00048
Location:402 – 465
Blast Score: 138
- DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...
- cl02675
Location:88 – 342
Blast Score: 952
- DZF; DZF domain
-
NM_017620.2 → NP_060090.2 interleukin enhancer-binding factor 3 isoform d
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) represents the longest transcript and encodes the longest isoform (d).
- Source sequence(s)
-
AF167570, AJ271744, AJ271747, BC018633, BC064836, DC320902
- Consensus CDS
-
CCDS45965.1
- UniProtKB/TrEMBL
-
G5E9M5
- UniProtKB/Swiss-Prot
-
Q12906
- Related
- ENSP00000404121, ENST00000449870
- Conserved Domains (2) summary
-
- cd00048
Location:402 – 465
Blast Score: 138
- DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...
- cl02675
Location:88 – 342
Blast Score: 953
- DZF; DZF domain
-
NM_153464.2 → NP_703194.1 interleukin enhancer-binding factor 3 isoform c
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 3' UTR and coding region compared to variant 4. The resulting isoform (c) has a distinct C-terminus compared to isoform d. This isoform is also called DRBP76 delta and ILF3-C.
- Source sequence(s)
-
AJ271745, AJ271746, AJ271747, AW576353, DC320902, X98264
- Consensus CDS
-
CCDS45966.1
- UniProtKB/Swiss-Prot
-
Q12906
- Related
- ENSP00000405436, ENST00000420083
- Conserved Domains (2) summary
-
- cd00048
Location:402 – 465
Blast Score: 140
- DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...
- cl02675
Location:88 – 342
Blast Score: 942
- DZF; DZF domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p5 Primary Assembly
Genomic
-
NC_000019.9 Reference GRCh37.p5 Primary Assembly
- Range
- 10764937..10803095
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000151.1 Alternate HuRef
- Range
- 10342365..10380213
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)