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    CG8235 [ Drosophila melanogaster ]

    Gene ID: 35892, updated on 8-Jan-2012
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    Summary

    Official Symbol
    CG8235provided by Flybase
    Primary source
    FLYBASE:FBgn0033351
    Locus tag
    Dmel_CG8235
    Gene type
    protein coding
    RNA name
    CG8235
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG8235
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    Genomic context

    Location :
    44F8-44F8
    Sequence :
    Chromosome: 2R; NT_033778.3 (4814519..4815605, complement)
    See CG8235 in Epigenomics, MapViewer

    Chromosome 2R - NT_033778.3Genomic Context describing neighboring genes Neighboring gene CG8243 gene product from transcript CG8243-RA Neighboring gene CG8237 gene product from transcript CG8237-RA Neighboring gene CG8232 gene product from transcript CG8232-RA Neighboring gene CG13749 gene product from transcript CG13749-RB

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    2. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    3. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    4. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208.
    5. Heterochromatic sequences in a Drosophila whole-genome shotgun assembly. Hoskins RA, et al. Genome Biol, 2002. PMID 12537574.

    See all (9) citations in PubMed

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:61730 BioGRID:58550 CG11802    BioGRID  PubMed Two-hybrid 
    BioGRID:61730 BioGRID:68074 CG31324    BioGRID  PubMed Two-hybrid 
    BioGRID:61730 BioGRID:64430 CG5026    BioGRID  PubMed Two-hybrid 
    BioGRID:61730 BioGRID:64569 CG8065    BioGRID  PubMed Two-hybrid 
    BioGRID:61730 BioGRID:63042 CG9418    BioGRID  PubMed Two-hybrid 
    BioGRID:61730 BioGRID:65187 CG9951    BioGRID  PubMed Two-hybrid 
    BioGRID:61730 BioGRID:69415 Fer2LCH    BioGRID  PubMed Two-hybrid 
    BioGRID:61730 BioGRID:61790 Mad1    BioGRID  PubMed Two-hybrid 
    BioGRID:61730 BioGRID:67191 PP2A-B'    BioGRID  PubMed Two-hybrid 
    BioGRID:61730 BioGRID:60097 homer    BioGRID  PubMed Two-hybrid 
    BioGRID:61730 BioGRID:64547 iPLA2-VIA    BioGRID  PubMed Two-hybrid 
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    General gene information

    Homology

    • Homologs of the CG8235 gene: The CG8235 gene is conserved in human, chimpanzee, dog, cow, mouse, rat, chicken, zebrafish, and mosquito.

    Pathways from BioSystems

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    tRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    aminoacyl-tRNA synthetase multienzyme complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
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    General protein information

    Preferred Names
    CG8235 gene product from transcript CG8235-RA
    Names
    CG8235
    CG8235-PA
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.3

      Range
      4814519..4815605, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_136582.3 → NP_610426.2  CG8235 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1Z7K8
      Related
      FBpp0087757, FBtr0088676
      Conserved Domains (1) summary
      cd02799
      Location:161 – 262
      Blast Score: 414
      tRNA_bind_EMAP-II_like; tRNA-binding-domain-containing EMAP2-like proteins. This family contains a diverse fraction of tRNA binding proteins, including Caenorhabditis elegans methionyl-tRNA synthetase (CeMetRS), human tyrosyl- tRNA synthetase (hTyrRS), Saccharomyces cerevisiae ...
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE013599.4 AAF59019.2
    genomic HC988381.1 CBV13900.1
    genomic HB904938.1 CBF84166.1
    genomic HC949791.1 CBU95104.1
    genomic HB930972.1 CBG00380.1
    genomic HB892382.1 CBF71214.1
    genomic HC962347.1 CBV01148.1
    genomic HB909527.1 CBF89220.1
    genomic HC966936.1 CBV03393.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    Q9V504.1 GenPept
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    Additional Links

    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content