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Tc00.1047053504443.10 ubiquitin hydrolase, putative [ Trypanosoma cruzi ]

Gene ID: 3537278, updated on 23-Nov-2023

Summary

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Gene symbol
Tc00.1047053504443.10
Gene description
ubiquitin hydrolase, putative
Locus tag
Tc00.1047053504443.10
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Trypanosoma cruzi (strain: CL Brener)
Lineage
Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Trypanosoma; Schizotrypanum
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Genomic context

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See Tc00.1047053504443.10 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_919787.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_919787.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020725
  2. Comparative genomics of trypanosomatid parasitic protozoa. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020724

GeneRIFs: Gene References Into Functions

General gene information

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Homology

  • heterozygous, non-Esmeraldo-like haplotype

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proteasome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of proteasomal protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin hydrolase, putative
XP_807112.1
  • curated by J. Mottram.
    heterozygous, non-Esmeraldo-like haplotype

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_919787.1 Reference assembly

    Range
    4598..5992 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_802019.1 → XP_807112.1  ubiquitin hydrolase, putative [Trypanosoma cruzi]

    See identical proteins and their annotated locations for XP_807112.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2V2WGG3, Q4CYB0
    Conserved Domains (4) summary
    smart00213
    Location:3 → 73
    UBQ; Ubiquitin homologues
    cl02553
    Location:108 → 451
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    pfam00240
    Location:5 → 72
    ubiquitin; Ubiquitin family
    pfam00443
    Location:106 → 450
    UCH; Ubiquitin carboxyl-terminal hydrolase
Nucleotide Protein
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