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CG15172 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 35167, updated on 4-Apr-2024

Summary

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Official Symbol
CG15172provided by FlyBase
Primary source
FLYBASE:FBgn0032740
Locus tag
Dmel_CG15172
See related
AllianceGenome:FB:FBgn0032740
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG15172
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Genomic context

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Location:
37B9-37B9; 2-54 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (19022417..19023646)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (19022417..19023646)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45292 Neighboring gene long non-coding RNA:CR44184 Neighboring gene long non-coding RNA:CR43700 Neighboring gene similar to Deadpan

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comprehensive Identification and Alternative Splicing of Microexons in Drosophila. Pang TL, et al. Front Genet, 2021. PMID 33859668, Free PMC Article
  2. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208
  3. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
  4. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article
  5. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article

See all (17) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG15172-PA
CG15172-PB
CG15172-PC
CG15172-PD

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    19022417..19023646
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001273622.1 → NP_001260551.1  uncharacterized protein Dmel_CG15172, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001260551.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VJ17

  2. NM_136088.2 → NP_609932.1  uncharacterized protein Dmel_CG15172, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609932.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VJ17
    Related
    FBpp0080684

  3. NM_001273624.1 → NP_001260553.1  uncharacterized protein Dmel_CG15172, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001260553.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VJ17

  4. NM_001273623.1 → NP_001260552.1  uncharacterized protein Dmel_CG15172, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001260552.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VJ17
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VJ17 Q9VJ17

Gene LinkOut

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