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CG5674 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 35072, updated on 4-Apr-2024

Summary

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Official Symbol
CG5674provided by FlyBase
Primary source
FLYBASE:FBgn0032656
Locus tag
Dmel_CG5674
See related
AllianceGenome:FB:FBgn0032656
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG5674
Summary
Is expressed in organism. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
36E3-36E3; 2-53 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (17963379..17974868)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (17963379..17974868)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44399 Neighboring gene long non-coding RNA:CR44398 Neighboring gene long non-coding RNA:CR44397 Neighboring gene beethoven Neighboring gene uncharacterized protein Neighboring gene Proteasome beta5 subunit-related 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Drosophila N-cadherin mediates an attractive interaction between photoreceptor axons and their targets. Prakash S, et al. Nat Neurosci, 2005 Apr. PMID 15735641, Free PMC Article
  2. The role of the RING-finger protein Elfless in Drosophila spermatogenesis and apoptosis. Caldwell JC, et al. Fly (Austin), 2008 Nov-Dec. PMID 19077536, Free PMC Article
  3. Genome-wide analysis of Notch signalling in Drosophila by transgenic RNAi. Mummery-Widmer JL, et al. Nature, 2009 Apr 23. PMID 19363474, Free PMC Article
  4. Identification of genes that promote or inhibit olfactory memory formation in Drosophila. Walkinshaw E, et al. Genetics, 2015 Apr. PMID 25644700, Free PMC Article
  5. Seizure control through genetic and pharmacological manipulation of Pumilio in Drosophila: a key component of neuronal homeostasis. Lin WH, et al. Dis Model Mech, 2017 Feb 1. PMID 28067623, Free PMC Article

See all (23) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

mobile_element

  • Loc: 17973634-17974099 mobile_element_type = transposon:INE-1{}3480

General protein information

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Preferred Names
uncharacterized protein
Names
CG5674-PA
CG5674-PB
CG5674-PD
CG5674-PE

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    17963379..17974868
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_165232.2 → NP_724077.1  uncharacterized protein Dmel_CG5674, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_724077.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VJB5
    Related
    FBpp0080575
    Conserved Domains (1) summary
    TIGR01642
    Location:25 → 119
    U2AF_lg; U2 snRNP auxilliary factor, large subunit, splicing factor

  2. NM_136012.5 → NP_609856.4  uncharacterized protein Dmel_CG5674, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609856.4

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8INY6
    Related
    FBpp0080574
    Conserved Domains (1) summary
    TIGR01642
    Location:37 → 190
    U2AF_lg; U2 snRNP auxilliary factor, large subunit, splicing factor

  3. NM_001299092.1 → NP_001286021.1  uncharacterized protein Dmel_CG5674, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286021.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    X2JEH3
    Conserved Domains (1) summary
    PTZ00121
    Location:2 → 136
    PTZ00121; MAEBL; Provisional

  4. NM_165233.3 → NP_724079.2  uncharacterized protein Dmel_CG5674, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_724079.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8INY5
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8INY5 Q8INY5
Q8INY6 Q8INY6
Q9VJB5 Q9VJB5
X2JEH3 X2JEH3

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