FAM131C family with sequence similarity 131, member C [Homo sapiens] - Gene

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Summary

Official Symbol: FAM131Cprovided by HGNC
Official Full Name: family with sequence similarity 131, member Cprovided by HGNC
Primary source: HGNC:26717
See related: Ensembl:ENSG00000185519; HPRD:08779; Vega:OTTHUMG00000009525
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Homo sapiens
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as: C1orf117; RP11-5P18.9; FLJ36766

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Genomic context

Location :: 1p36.13

Sequence :: Chromosome: 1; NC_000001.10 (16384264..16400127, complement)

See FAM131C in Epigenomics, MapViewer

Chromosome 1 - NC_000001.10 Genomic Context describing neighboring genes

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Genomic regions, transcripts, and products

Genomic Sequence

Go to nucleotideGraphics FASTA GenBank

Go to reference sequence details

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Bibliography

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Submit: New GeneRIF Correction

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Phenotypes

Review eQTL and phenotype association data in this region using PheGenI

A genome-wide study of common SNPs and CNVs in cognitive performance in the CANTAB.

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Products	Interactant	Other Gene	Source	Pubs	Description
Q96AQ9	Q96EY1	DNAJA3	HPRD	PubMed
Q96AQ9	Q01844	EWSR1	HPRD	PubMed
Q96AQ9	P28799	GRN	HPRD	PubMed
Q96AQ9	Q9Y6D9	MAD1L1	HPRD	PubMed
Q96AQ9	P62760	VSNL1	HPRD	PubMed
BioGRID:131523	BioGRID:114547	DNAJA3	BioGRID	PubMed	Two-hybrid
BioGRID:131523	BioGRID:108431	EWSR1	BioGRID	PubMed	Two-hybrid
BioGRID:131523	BioGRID:109153	GRN	BioGRID	PubMed	Two-hybrid
BioGRID:131523	BioGRID:113971	MAD1L1	BioGRID	PubMed	Two-hybrid
BioGRID:131523	BioGRID:113286	VSNL1	BioGRID	PubMed	Two-hybrid

General gene information

Homology

Homologs of the FAM131C gene: The FAM131C gene is conserved in chimpanzee, , dog, cow, mouse, rat, and zebrafish.
Map Viewer (Mouse, Rat)

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General protein information

Preferred Names: protein FAM131C

Names: protein FAM131C

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NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_182623.2 → NP_872429.2 protein FAM131C

Status: VALIDATED

Source sequence(s)

AK094085, AL355994, AL529663, BC016848, BC037394, BG751253, DA112406

Consensus CDS

CCDS41270.1

UniProtKB/Swiss-Prot

Q96AQ9

Related

ENSP00000364814, OTTHUMP00000011116, ENST00000375662, OTTHUMT00000026319

RefSeqs of Annotated Genomes: Build 37.3

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh37.p5 Primary Assembly

Genomic

NC_000001.10 Reference GRCh37.p5 Primary Assembly

Range

16384264..16400127, complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

Alternate HuRef

Genomic

AC_000133.1 Alternate HuRef

Range

14902743..14918526, complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

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Related Sequences

Nucleotide		Protein
Heading	Accession and Version	Protein
genomic	AL355994.11	CAI16143.1
genomic	CH471167.1	EAW51767.1
		EAW51768.1
mRNA	AK094085.1	BAC04282.1
mRNA	AL529663.3	None
mRNA	BC016848.1	AAH16848.1
mRNA	BC037394.1	AAH37394.1
mRNA	BG751253.1	None
mRNA	DA112406.1	None
other-genetic	HQ447135.1	ADQ31622.1