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    CG6043 [ Drosophila melanogaster ]

    Gene ID: 34732, updated on 9-May-2012
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    Summary

    Official Symbol
    CG6043provided by Flybase
    Primary source
    FLYBASE:FBgn0032497
    Locus tag
    Dmel_CG6043
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG6043
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    Genomic context

    Location :
    34B3-34B4
    Sequence :
    Chromosome: 2L; NT_033779.4 (13261010..13284043)
    See CG6043 in Epigenomics, MapViewer

    Chromosome 2L - NT_033779.4Genomic Context describing neighboring genes Neighboring gene CG31851 gene product from transcript CG31851-RA Neighboring gene CG31730 gene product from transcript CG31730-RA Neighboring gene CG31848 gene product from transcript CG31848-RB Neighboring gene CG6108 gene product from transcript CG6108-RA Neighboring gene DNA fragmentation factor-related protein 4 Neighboring gene CG6116 gene product from transcript CG6116-RA Neighboring gene CG31729 gene product from transcript CG31729-RB Neighboring gene CG16824 gene product from transcript CG16824-RA

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    2. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    3. Prevalence of off-target effects in Drosophila RNA interference screens. Ma Y, et al. Nature, 2006 Sep 21. PMID 16964239.
    4. Mating-responsive genes in reproductive tissues of female Drosophila melanogaster. Mack PD, et al. Proc Natl Acad Sci U S A, 2006 Jul 5. PMID 16798875.
    5. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:60770 BioGRID:59859 CG15634    BioGRID  PubMed Two-hybrid 
    BioGRID:60770 BioGRID:58851 CG15646    BioGRID  PubMed Two-hybrid 
    BioGRID:60770 BioGRID:62468 Zasp52    BioGRID  PubMed Two-hybrid 
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    General gene information

    Markers

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    General protein information

    Preferred Names
    CG6043 gene product from transcript CG6043-RG
    Names
    CG6043
    CG6043-PC
    CG6043-PD
    CG6043-PF
    CG6043-PG
    CG6043-PH
    CG6043-PI
    CG6043-PJ
    CG6043-PK
    CG6043-PL
    CG6043-PM
    CG6043-PN
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.4

      Range
      13261010..13284043
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001103687.2 → NP_001097157.1  CG6043, isoform G [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8DYZ9
      Related
      FBpp0111953, FBtr0113040

    2. NM_135785.2 → NP_609629.1  CG6043, isoform D [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IP76
      Related
      FBpp0088849, FBtr0089910

    3. NM_165035.3 → NP_723802.2  CG6043, isoform H [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A4V0N7
      Related
      FBpp0112963, FBtr0114471

    4. NM_165037.2 → NP_723804.1  CG6043, isoform C [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IP74
      Related
      FBpp0088850, FBtr0089911

    5. NM_001103686.2 → NP_001097156.1  CG6043, isoform F [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8DZ00
      Related
      FBpp0111952, FBtr0113039

    6. NM_001169497.1 → NP_001162968.1  CG6043, isoform I [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      C3KKC6
      Related
      FBpp0291348, FBtr0302138

    7. NM_001169498.1 → NP_001162969.1  CG6043, isoform J [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      E1JHH0
      Related
      FBpp0291349, FBtr0302139

    8. NM_001169499.1 → NP_001162970.1  CG6043, isoform K [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      E1JHH0
      Related
      FBpp0291350, FBtr0302140

    9. NM_001259091.1 → NP_001246020.1  CG6043, isoform N [Drosophila melanogaster]

      Status: REVIEWED

    10. NM_165034.2 → NP_723801.2  CG6043, isoform L [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      C3KKC6
      Related
      FBpp0291351, FBtr0302141

    11. NM_001259090.1 → NP_001246019.1  CG6043, isoform M [Drosophila melanogaster]

      Status: REVIEWED

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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014134.5 ABV53677.1
    genomic AE014134.5 AAN10830.1
    genomic AE014134.5 AAN10831.2
    genomic AE014134.5 AAN10833.1
    genomic AE014134.5 ABV53676.1
    mRNA BT083391.1 ACQ66052.1
    genomic AE014134.5 ACZ94254.1
    genomic AE014134.5 AAF53274.3
    genomic AE014134.5 ACZ94256.1
    genomic AE014134.5 ACZ94255.1
    genomic AE014134.5 AFH03694.1
    genomic AE014134.5 AFH03693.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8IP76.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content