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    CG9426 [ Drosophila melanogaster ]

    Gene ID: 34719, updated on 21-Jan-2012
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    Summary

    Official Symbol
    CG9426provided by Flybase
    Primary source
    FLYBASE:FBgn0032485
    Locus tag
    Dmel_CG9426
    Gene type
    protein coding
    RNA name
    CG9426
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG9426; Ipp
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    Genomic context

    Location :
    34A10-34A10
    Sequence :
    Chromosome: 2L; NT_033779.4 (13216290..13219933, complement)
    See CG9426 in Epigenomics, MapViewer

    Chromosome 2L - NT_033779.4Genomic Context describing neighboring genes Neighboring gene kekkon4 Neighboring gene small nuclear RNA U2 at 34ABb Neighboring gene CG5705 gene product from transcript CG5705-RA Neighboring gene CG15481 gene product from transcript CG15481-RA Neighboring gene CG16812 gene product from transcript CG16812-RA

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Vector and parameters for targeted transgenic RNA interference in Drosophila melanogaster. Ni JQ, et al. Nat Methods, 2008 Jan. PMID 18084299.
    2. A ubiquitin ligase complex regulates caspase activation during sperm differentiation in Drosophila. Arama E, et al. PLoS Biol, 2007 Oct. PMID 17880263.
    3. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    4. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    5. Developmental control of nuclear morphogenesis and anchoring by charleston, identified in a functional genomic screen of Drosophila cellularisation. Pilot F, et al. Development, 2006 Feb. PMID 16421189.

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:60757 BioGRID:68328 Brd8    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:65591 CG10508    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:64028 CG11350    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:63867 CG11486    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:61521 CG12835    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:62970 CG13423    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:62906 CG15120    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:58210 CG15336    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:61844 CG1599    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:59639 CG17237    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:58329 CG17446    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:57567 CG17778    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:59177 CG18259    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:77402 CG31523    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:77418 CG31826    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:57698 CG32801    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:77490 CG32803    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:63022 CG3295    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:67992 CG4553    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:62763 CG5726    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:63721 CG7879    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:62509 CG8435    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:65565 CSN3    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:68567 CycG    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:64171 D19A    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:61922 G-oalpha47A    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:63144 GM130    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:77555 LpR1    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:65509 RhoBTB    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:57940 SIP3    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:63132 Snp    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:72428 alpha-catenin-related    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:59522 aru    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:62282 fl(2)d    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:67802 mRpS24    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:68123 ms(3)K81    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:65884 noi    BioGRID  PubMed Two-hybrid 
    BioGRID:60757 BioGRID:68777 sol    BioGRID  PubMed Two-hybrid 
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    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    actin binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    cytoplasmic sequestering of transcription factor ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
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    General protein information

    Preferred Names
    CG9426 gene product from transcript CG9426-RA
    Names
    CG9426
    CG9426-PA
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.4

      Range
      13216290..13219933, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135772.1 → NP_609616.1  CG9426 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VK21
      Related
      FBpp0080063, FBtr0080484
      Conserved Domains (4) summary
      PHA03098
      Location:78 – 558
      Blast Score: 571
      PHA03098; kelch-like protein; Provisional
      cl06652
      Location:187 – 287
      Blast Score: 291
      BACK; BTB And C-terminal Kelch
      cl02518
      Location:73 – 179
      Blast Score: 276
      BTB; BTB/POZ domain
      cl02701
      Location:385 – 431
      Blast Score: 163
      Kelch_1; Kelch motif
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    mRNA AY118728.1 AAM50588.1
    genomic AE014134.5 AAF53261.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    Q9VK21.1 GenPept
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    Additional Links

    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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