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    A16 [ Drosophila melanogaster ]

    Gene ID: 34700, updated on 26-Jan-2012
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    Summary

    Official Symbol
    A16provided by Flybase
    Primary source
    FLYBASE:FBgn0028965
    Locus tag
    Dmel_CG9933
    Gene type
    protein coding
    RNA name
    A16
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG9933; Dmel\CG9933
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    Genomic context

    Location :
    34A4-34A4
    Sequence :
    Chromosome: 2L; NT_033779.4 (13019575..13021307, complement)
    See A16 in Epigenomics, MapViewer

    Chromosome 2L - NT_033779.4Genomic Context describing neighboring genes Neighboring gene Target of rapamycin Neighboring gene CG9934 gene product from transcript CG9934-RB Neighboring gene CG9932 gene product from transcript CG9932-RA Neighboring gene CG5142 gene product from transcript CG5142-RC

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    2. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    3. Towards a comprehensive analysis of the protein phosphatase 1 interactome in Drosophila. Bennett D, et al. J Mol Biol, 2006 Nov 24. PMID 17007873.
    4. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    5. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208.

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:60738 BioGRID:58020 Act5C    BioGRID  PubMed Two-hybrid 
    BioGRID:60738 BioGRID:64536 CG14168    BioGRID  PubMed Two-hybrid 
    BioGRID:60738 BioGRID:67547 CG6439    BioGRID  PubMed Two-hybrid 
    BioGRID:60738 BioGRID:60055 CG9527    BioGRID  PubMed Two-hybrid 
    BioGRID:60738 BioGRID:63147 Fmr1    BioGRID  PubMed Two-hybrid 
    BioGRID:60738 BioGRID:62469 Poxn    BioGRID  PubMed Two-hybrid 
    BioGRID:60738 BioGRID:72126 Pp1-87B    BioGRID  PubMed Two-hybrid 
    BioGRID:60738 BioGRID:67848 Pp1alpha-96A    BioGRID  PubMed Two-hybrid 
    BioGRID:60738 BioGRID:68919 RpL8    BioGRID  PubMed Two-hybrid 
    BioGRID:60738 BioGRID:62251 cnn    BioGRID  PubMed Two-hybrid 
    BioGRID:60738 BioGRID:67276 dnk    BioGRID  PubMed Two-hybrid 
    BioGRID:60738 BioGRID:63241 inaD    BioGRID  PubMed Two-hybrid 
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    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    protein phosphatase 1 binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Preferred Names
    CG9933 gene product from transcript CG9933-RA
    Names
    A16
    A16-PA
    CG9933-PA
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.4

      Range
      13019575..13021307, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135754.3 → NP_609598.1  A16 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VK43
      Related
      FBpp0080008, FBtr0080427
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    mRNA AY122156.1 AAM52668.1
    genomic AE014134.5 AAF53239.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    Q9VK43.1 GenPept
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    Additional Links

    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content