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    CG5792 [ Drosophila melanogaster ]

    Gene ID: 34685, updated on 9-May-2012
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    Summary

    Official Symbol
    CG5792provided by Flybase
    Primary source
    FLYBASE:FBgn0032455
    Locus tag
    Dmel_CG5792
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG5792
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    Genomic context

    Location :
    33F3-33F4
    Sequence :
    Chromosome: 2L; NT_033779.4 (12713276..12721957, complement)
    See CG5792 in Epigenomics, MapViewer

    Chromosome 2L - NT_033779.4Genomic Context describing neighboring genes Neighboring gene CG6180 gene product from transcript CG6180-RA Neighboring gene CG5787 gene product from transcript CG5787-RA Neighboring gene Multidrug-Resistance like Protein 1 Neighboring gene CG15483 gene product from transcript CG15483-RA Neighboring gene kekkon-1

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. A protein complex network of Drosophila melanogaster. Guruharsha KG, et al. Cell, 2011 Oct 28. PMID 22036573.
    2. A microtubule interactome: complexes with roles in cell cycle and mitosis. Hughes JR, et al. PLoS Biol, 2008 Apr 22. PMID 18433294.
    3. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    4. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    5. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:60729 BioGRID:63416 Adk2    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:66376 Art4    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:60729 BioGRID:57617 CDC45L    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:66484 CG10703    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:64868 CG10710    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:66596 CG12256    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:58678 CG12725    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:60468 CG13138    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:62970 CG13423    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:62958 CG13871    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:533580 CG14425    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:58746 CG1461    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:58666 CG15745    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:58019 CG16721    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:60760 CG16812    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:66332 CG16817    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:60729 BioGRID:66509 CG17230    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:59177 CG18259    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:59881 CG3008    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:60729 BioGRID:62819 CG30122    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:61575 CG30492    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:61548 CG30502    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:68394 CG31038    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:67497 CG3308    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:63050 CG4286    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:67395 CG4360    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:67377 CG4854    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:59556 CG4896    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:62713 CG5009    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:67290 CG6040    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:67257 CG7715    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:68432 CG7946    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:64872 CG8745    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:60319 CG9463    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:66364 CG9467    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:60729 BioGRID:59308 CG9576    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:65193 Cpr73D    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:61002 Cyt-c-d    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:61003 Cyt-c-p    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:64018 DOR    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:61791 Drep-2    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:64332 ERR    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:65195 Exn    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:60312 Glt    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:60729 BioGRID:67143 Hmx    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:67368 Hs6st    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:71509 Hsp60B    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:65272 MED19    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:63783 Mfap1    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:67960 Nup358    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:60729 BioGRID:65084 PDCD-5    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:64690 Pi3K68D    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:60729 BioGRID:62897 RpL11    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:59391 Sep1    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:59325 Syx16    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:61868 TER94    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:60729 BioGRID:62035 Tret1-1    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:71878 boca    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:60729 BioGRID:57745 crn    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:66825 cv-c    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:64252 eco    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:63438 enok    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:68952 flw    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:72324 fs(2)ltoPP43    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:58812 gce    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:61418 gp210    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:60729 BioGRID:59242 l(1)G0156    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:60729 BioGRID:62427 mRpL41    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:65288 mus304    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:63677 mwh    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:62356 phyl    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:59392 slgA    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:68746 spag    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:66636 trus    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:59907 vkg    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:60729 BioGRID:68274 wdn    BioGRID  PubMed Two-hybrid 
    BioGRID:60729 BioGRID:77850 zormin    BioGRID  PubMed Two-hybrid 
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    General gene information

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    microtubule associated complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
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    General protein information

    Preferred Names
    CG5792 gene product from transcript CG5792-RA
    Names
    CG5792
    CG5792-PA
    CG5792-PD
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.4

      Range
      12713276..12721957, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135746.4 → NP_609590.1  CG5792, isoform A [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VK57
      Related
      FBpp0088847, FBtr0089908
      Conserved Domains (1) summary
      pfam08190
      Location:45 – 332
      Blast Score: 736
      PIH1; pre-RNA processing PIH1/Nop17

    2. NM_165019.4 → NP_723771.4  CG5792, isoform D [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VK58
      Related
      FBpp0290386, FBtr0301163
      Conserved Domains (1) summary
      PRK12678
      Location:183 – 337
      Blast Score: 104
      PRK12678; transcription termination factor Rho; Provisional
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014134.5 AAF53221.1
    mRNA AY061192.1 AAL28740.1
    genomic AE014134.5 AAF53222.5
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VK57.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content