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    CG5390 [ Drosophila melanogaster ]

    Gene ID: 34383, updated on 10-May-2012
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    Summary

    Official Symbol
    CG5390provided by Flybase
    Primary source
    FLYBASE:FBgn0032213
    Locus tag
    Dmel_CG5390
    Gene type
    protein coding
    RNA name
    CG5390
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BEST:GH06341; c-SPH35; Dmel\CG5390; gh06341; SPH35
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    Genomic context

    Location :
    31D1-31D1
    Sequence :
    Chromosome: 2L; NT_033779.4 (10304063..10306594, complement)
    See CG5390 in Epigenomics, MapViewer

    Chromosome 2L - NT_033779.4Genomic Context describing neighboring genes Neighboring gene CG13138 gene product from transcript CG13138-RB Neighboring gene no mitochondrial derivative Neighboring gene CG4968 gene product from transcript CG4968-RA Neighboring gene Cdk5 activator-like protein

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. Blanco E, et al. BMC Dev Biol, 2010 Sep 2. PMID 20813047.
    2. A novel histone fold domain-containing protein that replaces TAF6 in Drosophila SAGA is required for SAGA-dependent gene expression. Weake VM, et al. Genes Dev, 2009 Dec 15. PMID 20008933.
    3. Enhanced function annotations for Drosophila serine proteases: a case study for systematic annotation of multi-member gene families. Shah PK, et al. Gene, 2008 Jan 15. PMID 17996400.
    4. Tumor suppressor CYLD regulates JNK-induced cell death in Drosophila. Xue L, et al. Dev Cell, 2007 Sep. PMID 17765686.
    5. Evolutionary dynamics of immune-related genes and pathways in disease-vector mosquitoes. Waterhouse RM, et al. Science, 2007 Jun 22. PMID 17588928.

    See all (25) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:60469 BioGRID:57550 CG12470    BioGRID  PubMed Two-hybrid 
    BioGRID:60469 BioGRID:65377 CG14089    BioGRID  PubMed Two-hybrid 
    BioGRID:60469 BioGRID:77410 CG31743    BioGRID  PubMed Two-hybrid 
    BioGRID:60469 BioGRID:624954 CG34380    BioGRID  PubMed Two-hybrid 
    BioGRID:60469 BioGRID:58854 CG8128    BioGRID  PubMed Two-hybrid 
    BioGRID:60469 BioGRID:62567 Cdk4    BioGRID  PubMed Two-hybrid 
    BioGRID:60469 BioGRID:66831 HtrA2    BioGRID  PubMed Two-hybrid 
    BioGRID:60469 BioGRID:61671 Lcp2    BioGRID  PubMed Two-hybrid 
    BioGRID:60469 BioGRID:64739 RhoGAP68F    BioGRID  PubMed Two-hybrid 
    BioGRID:60469 BioGRID:61832 dap    BioGRID  PubMed Two-hybrid 
    BioGRID:60469 BioGRID:61158 hk    BioGRID  PubMed Two-hybrid 
    BioGRID:60469 BioGRID:58031 rux    BioGRID  PubMed Two-hybrid 
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    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    NOT serine-type endopeptidase activity NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Preferred Names
    CG5390 gene product from transcript CG5390-RA
    Names
    CG5390
    CG5390-PA
    NP_609374.1
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.4

      Range
      10304063..10306594, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135530.2 → NP_609374.1  CG5390 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VL01
      Related
      FBpp0079653, FBtr0080064
      Conserved Domains (1) summary
      cd00190
      Location:153 – 391
      Blast Score: 550
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    mRNA BT044284.1 ACH92349.1
    genomic AE014134.5 AAF52904.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VL01.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content