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    CG5708 [ Drosophila melanogaster ]

    Gene ID: 34361, updated on 8-Jan-2012

    Summary

    Official Symbol
    CG5708provided by Flybase
    Primary source
    FLYBASE:FBgn0032196
    Locus tag
    Dmel_CG5708
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG5708

    Genomic context

    Location :
    31B1-31B1
    Sequence :
    Chromosome: 2L; NT_033779.4 (10224664..10226808, complement)
    See CG5708 in Epigenomics, MapViewer

    Chromosome 2L - NT_033779.4Genomic Context describing neighboring genes Neighboring gene Proteasome 35kD subunit Neighboring gene CG4908 gene product from transcript CG4908-RB Neighboring gene CG5694 gene product from transcript CG5694-RA Neighboring gene CG4912 gene product from transcript CG4912-RB

    Bibliography

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:60452 BioGRID:67008 Akt1    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:64801 Atg1    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:68121 BM-40-SPARC    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:57560 CG13373    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:62970 CG13423    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:63022 CG3295    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:67706 CG4393    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:67527 CG6800    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:60245 CG8455    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:62567 Cdk4    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:62461 Cdk5    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:63418 Chi    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:66209 Cks85A    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:65193 Cpr73D    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:64701 CycA    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:68567 CycG    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:65669 CycH    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:63921 CycJ    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:72482 CycK    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:61336 E2f2    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:66046 Mlp84B    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:63539 Orc4    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:61322 RPA2    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:61202 RanGap    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:65629 SAK    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:67396 Sirt2    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:67158 ald    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:67428 cdc2c    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:61832 dap    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:61001 grp    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:65450 hale    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:67231 koko    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:68673 nej    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:68973 pie    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:69325 plu    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:61701 ptc    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:65883 rev7    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:77769 squ    BioGRID  PubMed Two-hybrid 
    BioGRID:60452 BioGRID:76691 stg1    BioGRID  PubMed Two-hybrid 

    General protein information

    Preferred Names
    CG5708 gene product from transcript CG5708-RB
    Names
    CG5708
    CG5708-PA
    CG5708-PB

    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.4

      Range
      10224664..10226808, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_164893.1NP_723534.1  CG5708, isoform B [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VL21
      Related
      FBpp0079546, FBtr0079956
      Conserved Domains (2) summary
      cd09386
      Location:78132
      Blast Score: 272
      LIM1_LMO4; The first LIM domain of LMO4 (LIM domain only protein 4)
      cl02475
      Location:142212
      Blast Score: 170
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers.
    2. NM_135515.1NP_609359.1  CG5708, isoform A [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VL21
      Related
      FBpp0079545, FBtr0079955
      Conserved Domains (2) summary
      cd09386
      Location:78132
      Blast Score: 272
      LIM1_LMO4; The first LIM domain of LMO4 (LIM domain only protein 4)
      cl02475
      Location:142212
      Blast Score: 170
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers.

    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    mRNA BT012487.1 AAS93758.1
    genomic AE014134.5 AAF52877.2
    genomic AE014134.5 AAN10724.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    Q9VL21.1 GenPept

      Supplemental Content

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