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BRINP3 bone morphogenetic protein/retinoic acid inducible neural-specific 3 [ Homo sapiens (human) ]

Gene ID: 339479, updated on 13-Sep-2014
Official Symbol
BRINP3provided by HGNC
Official Full Name
bone morphogenetic protein/retinoic acid inducible neural-specific 3provided by HGNC
Primary source
HGNC:HGNC:22393
Locus tag
RP11-445K1.1
See related
Ensembl:ENSG00000162670; HPRD:16782; Vega:OTTHUMG00000035533
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FAM5C; DBCCR1L; DBCCR1L1
See BRINP3 in Epigenomics, MapViewer
Location:
1q31.1
Exon count:
13
Annotation release Status Assembly Chr Location
106 current GRCh38 (GCF_000001405.26) 1 NC_000001.11 (190097662..190478404, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (190066792..190447534, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene RNA, 5S ribosomal pseudogene 73 Neighboring gene DEAH (Asp-Glu-Ala-His) box polypeptide 29 pseudogene Neighboring gene long intergenic non-protein coding RNA 1351 Neighboring gene uncharacterized LOC440704 Neighboring gene heterogeneous nuclear ribonucleoprotein A1 pseudogene 46

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

NHGRI GWAS Catalog

Description
Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study.
NHGRI GWA Catalog
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by GOA

Process Evidence Code Pubs
cell cycle arrest IEA
Inferred from Electronic Annotation
more info
 
cellular response to retinoic acid ISS
Inferred from Sequence or Structural Similarity
more info
 
negative regulation of mitotic cell cycle ISS
Inferred from Sequence or Structural Similarity
more info
 
positive regulation of neuron differentiation ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
dendrite IEA
Inferred from Electronic Annotation
more info
 
endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 
extracellular region IEA
Inferred from Electronic Annotation
more info
 
mitochondrion IEA
Inferred from Electronic Annotation
more info
 
neuronal cell body IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
BMP/retinoic acid-inducible neural-specific protein 3
Names
BMP/retinoic acid-inducible neural-specific protein 3
protein FAM5C
DBCCR1-like protein 1
family with sequence similarity 5, member C

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_199051.1NP_950252.1  BMP/retinoic acid-inducible neural-specific protein 3 precursor

    See proteins identical to NP_950252.1

    Status: PROVISIONAL

    Source sequence(s)
    AB111893
    Consensus CDS
    CCDS1373.1
    UniProtKB/Swiss-Prot
    Q76B58
    Related
    ENSP00000356432, OTTHUMP00000033554, ENST00000367462, OTTHUMT00000086278
    Conserved Domains (1) summary
    smart00457
    Location:79263
    MACPF; membrane-attack complex / perforin

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38 Primary Assembly

Genomic

  1. NC_000001.11 

    Range
    190097662..190478404
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005245117.1XP_005245174.1  

    See proteins identical to XP_005245174.1

    UniProtKB/Swiss-Prot
    Q76B58
    Conserved Domains (1) summary
    smart00457
    Location:79263
    MACPF; membrane-attack complex / perforin
  2. XM_005245120.1XP_005245177.1  

    See proteins identical to XP_005245177.1

    UniProtKB/Swiss-Prot
    Q76B58
    Conserved Domains (1) summary
    smart00457
    Location:79263
    MACPF; membrane-attack complex / perforin
  3. XM_005245119.1XP_005245176.1  

    See proteins identical to XP_005245176.1

    UniProtKB/Swiss-Prot
    Q76B58
    Conserved Domains (1) summary
    smart00457
    Location:79263
    MACPF; membrane-attack complex / perforin
  4. XM_005245118.2XP_005245175.1  

    See proteins identical to XP_005245175.1

    UniProtKB/Swiss-Prot
    Q76B58
    Conserved Domains (1) summary
    smart00457
    Location:79263
    MACPF; membrane-attack complex / perforin
  5. XM_005245123.1XP_005245180.1  

    Conserved Domains (1) summary
    smart00457
    Location:79263
    MACPF; membrane-attack complex / perforin

Alternate HuRef

Genomic

  1. AC_000133.1 

    Range
    161301488..161681433
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate CHM1_1.1

Genomic

  1. NC_018912.2 

    Range
    191488894..191868789
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)