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    CG13996 [ Drosophila melanogaster ]

    Gene ID: 33842, updated on 9-May-2012
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    Summary

    Official Symbol
    CG13996provided by Flybase
    Primary source
    FLYBASE:FBgn0031763
    Locus tag
    Dmel_CG13996
    Gene type
    protein coding
    RNA name
    CG13996
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG13996
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    Genomic context

    Location :
    26B3-26B3
    Sequence :
    Chromosome: 2L; NT_033779.4 (6020850..6021672)
    See CG13996 in Epigenomics, MapViewer

    Chromosome 2L - NT_033779.4Genomic Context describing neighboring genes Neighboring gene CG9098 gene product from transcript CG9098-RA Neighboring gene Homeodomain protein 2.0 Neighboring gene CG9107 gene product from transcript CG9107-RA Neighboring gene CG9109 gene product from transcript CG9109-RA

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    2. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    3. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    4. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208.
    5. Heterochromatic sequences in a Drosophila whole-genome shotgun assembly. Hoskins RA, et al. Genome Biol, 2002. PMID 12537574.

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:60007 BioGRID:66149 Ada2b    BioGRID  PubMed Two-hybrid 
    BioGRID:60007 BioGRID:77134 Bsg    BioGRID  PubMed Two-hybrid 
    BioGRID:60007 BioGRID:67977 CG10550    BioGRID  PubMed Two-hybrid 
    BioGRID:60007 BioGRID:68033 CG17370    BioGRID  PubMed Two-hybrid 
    BioGRID:60007 BioGRID:60632 CG31705    BioGRID  PubMed Two-hybrid 
    BioGRID:60007 BioGRID:62713 CG5009    BioGRID  PubMed Two-hybrid 
    BioGRID:60007 BioGRID:66888 CG6904    BioGRID  PubMed Two-hybrid 
    BioGRID:60007 BioGRID:59221 CG7889    BioGRID  PubMed Two-hybrid 
    BioGRID:60007 BioGRID:67551 Cchl    BioGRID  PubMed Two-hybrid 
    BioGRID:60007 BioGRID:63230 CycB    BioGRID  PubMed Two-hybrid 
    BioGRID:60007 BioGRID:66030 Dfd    BioGRID  PubMed Two-hybrid 
    BioGRID:60007 BioGRID:64104 DnaJ-1    BioGRID  PubMed Two-hybrid 
    BioGRID:60007 BioGRID:60772 Drep-4    BioGRID  PubMed Two-hybrid 
    BioGRID:60007 BioGRID:57914 HLH4C    BioGRID  PubMed Two-hybrid 
    BioGRID:60007 BioGRID:67848 Pp1alpha-96A    BioGRID  PubMed Two-hybrid 
    BioGRID:60007 BioGRID:57590 RpL22    BioGRID  PubMed Two-hybrid 
    BioGRID:60007 BioGRID:66917 Tm2    BioGRID  PubMed Two-hybrid 
    BioGRID:60007 BioGRID:77885 btsz    BioGRID  PubMed Two-hybrid 
    BioGRID:60007 BioGRID:57954 dhd    BioGRID  PubMed Two-hybrid 
    BioGRID:60007 BioGRID:60496 mRpS7    BioGRID  PubMed Two-hybrid 
    BioGRID:60007 BioGRID:58172 p115    BioGRID  PubMed Two-hybrid 
    BioGRID:60007 BioGRID:68684 ras    BioGRID  PubMed Two-hybrid 
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    General gene information

    Markers

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    General protein information

    Preferred Names
    CG13996 gene product from transcript CG13996-RA
    Names
    CG13996
    CG13996-PA
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.4

      Range
      6020850..6021672
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135136.1 → NP_608980.1  CG13996 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VMJ2
      Related
      FBpp0078812, FBtr0079181
      Conserved Domains (1) summary
      cl15755
      Location:85 – 151
      Blast Score: 161
      SAM_superfamily; SAM (Sterile alpha motif )
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    mRNA BT124800.1 ADF87895.1
    genomic AE014134.5 AAF52324.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VMJ2.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content