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Myo1d myosin ID [ Mus musculus (house mouse) ]

Gene ID: 338367, updated on 8-May-2016
Official Symbol
Myo1dprovided by MGI
Official Full Name
myosin IDprovided by MGI
Primary source
MGI:MGI:107728
See related
Ensembl:ENSMUSG00000035441 Vega:OTTMUSG00000000216
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AW544947; D11Ertd9e; myosin-1d; 9930104H07Rik
Orthologs
Location:
11 B5; 11 47.95 cM
Exon count:
25
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 11 NC_000077.6 (80482126..80780055, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (80295629..80593527, complement)

Chromosome 11 - NC_000077.6Genomic Context describing neighboring genes Neighboring gene proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 Neighboring gene RIKEN cDNA C030013C21 gene Neighboring gene cyclin-dependent kinase 5, regulatory subunit 1 (p35) Neighboring gene predicted gene, 31109 Neighboring gene predicted gene, 38907 Neighboring gene predicted gene, 31042 Neighboring gene 39S ribosomal protein L27, mitochondrial pseudogene Neighboring gene predicted gene, 31228 Neighboring gene transmembrane protein 98

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Clone Names

  • MGC183676

Gene Ontology Provided by MGI

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
actin binding IEA
Inferred from Electronic Annotation
more info
 
actin filament binding ISO
Inferred from Sequence Orthology
more info
 
actin-dependent ATPase activity ISO
Inferred from Sequence Orthology
more info
 
calcium-dependent protein binding ISO
Inferred from Sequence Orthology
more info
 
calmodulin binding ISO
Inferred from Sequence Orthology
more info
 
microfilament motor activity ISO
Inferred from Sequence Orthology
more info
 
motor activity IEA
Inferred from Electronic Annotation
more info
 
nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
protein domain specific binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
cellular localization IDA
Inferred from Direct Assay
more info
PubMed 
negative regulation of phosphatase activity ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
apical dendrite ISO
Inferred from Sequence Orthology
more info
 
axolemma ISO
Inferred from Sequence Orthology
more info
 
axon IDA
Inferred from Direct Assay
more info
PubMed 
basolateral plasma membrane ISO
Inferred from Sequence Orthology
more info
 
brush border IDA
Inferred from Direct Assay
more info
PubMed 
brush border ISO
Inferred from Sequence Orthology
more info
 
cytoplasmic vesicle ISO
Inferred from Sequence Orthology
more info
 
extracellular exosome ISO
Inferred from Sequence Orthology
more info
 
myelin sheath IDA
Inferred from Direct Assay
more info
PubMed 
myelin sheath ISO
Inferred from Sequence Orthology
more info
 
myosin complex ISO
Inferred from Sequence Orthology
more info
 
neuron projection IDA
Inferred from Direct Assay
more info
PubMed 
neuronal cell body IDA
Inferred from Direct Assay
more info
PubMed 
neuronal cell body ISO
Inferred from Sequence Orthology
more info
 
plasma membrane raft ISO
Inferred from Sequence Orthology
more info
 
smooth endoplasmic reticulum ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
unconventional myosin-Id
Names
myo1d
myosin-Id

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_177390.3NP_796364.2  unconventional myosin-Id

    See identical proteins and their annotated locations for NP_796364.2

    Status: VALIDATED

    Source sequence(s)
    AK049374, AK148112
    Consensus CDS
    CCDS36242.1
    UniProtKB/Swiss-Prot
    Q5SYD0
    UniProtKB/TrEMBL
    Q3UG58
    Related
    ENSMUSP00000037819, OTTMUSP00000000278, ENSMUST00000041065, OTTMUST00000000637
    Conserved Domains (3) summary
    smart00242
    Location:4694
    MYSc; Myosin. Large ATPases
    pfam06017
    Location:8021005
    Myosin_TH1; Myosin tail
    cd01378
    Location:24682
    MYSc_Myo1; class I myosin, motor domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000077.6 Reference GRCm38.p3 C57BL/6J

    Range
    80482126..80780055 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011249085.1XP_011247387.1  

    Conserved Domains (2) summary
    pfam06017
    Location:303506
    Myosin_TH1; Myosin tail
    cl22853
    Location:14183
    Motor_domain; Myosin and Kinesin motor domain.
  2. XM_006533585.1XP_006533648.1  

    UniProtKB/Swiss-Prot
    Q5SYD0
    Related
    ENSMUSP00000066948, OTTMUSP00000000279, ENSMUST00000070997, OTTMUST00000000638
    Conserved Domains (3) summary
    smart00242
    Location:4694
    MYSc; Myosin. Large ATPases
    pfam06017
    Location:802905
    Myosin_TH1; Myosin tail
    cd01378
    Location:24682
    MYSc_Myo1; class I myosin, motor domain
  3. XM_006533586.2XP_006533649.1  

    Conserved Domains (2) summary
    smart00242
    Location:4512
    MYSc; Myosin. Large ATPases
    cl22853
    Location:24513
    Motor_domain; Myosin and Kinesin motor domain.
  4. XM_011249086.1XP_011247388.1  

    Conserved Domains (2) summary
    smart00242
    Location:4432
    MYSc; Myosin. Large ATPases
    cl22853
    Location:24437
    Motor_domain; Myosin and Kinesin motor domain.

Alternate Mm_Celera

Genomic

  1. AC_000033.1 Alternate Mm_Celera

    Range
    90120134..90418853 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)