My NCBISign In

Display Settings:

Format

Send to:

Choose Destination

    Bsg25D Blastoderm-specific gene 25D [ Drosophila melanogaster ]

    Gene ID: 33757, updated on 9-May-2012
    Help top of page

    Summary

    Official Symbol
    Bsg25Dprovided by Flybase
    Official Full Name
    Blastoderm-specific gene 25Dprovided by Flybase
    Primary source
    FLYBASE:FBgn0000228
    Locus tag
    Dmel_CG14025
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    brg25D; bsg25D; bsq25D; CG14025; Dmel\CG14025
    Help top of page

    Genomic context

    Location :
    25D2-25D3
    Sequence :
    Chromosome: 2L; NT_033779.4 (5271728..5278558, complement)
    See Bsg25D in Epigenomics, MapViewer

    Chromosome 2L - NT_033779.4Genomic Context describing neighboring genes Neighboring gene thickveins Neighboring gene CG17970 gene product from transcript CG17970-RB Neighboring gene CG14031 gene product from transcript CG14031-RA Neighboring gene Bub1 homologue Neighboring gene vrille

    Help top of page

    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
    Helptop of page

    Bibliography

    Related articles in PubMed

    1. Vasa promotes Drosophila germline stem cell differentiation by activating mei-P26 translation by directly interacting with a (U)-rich motif in its 3' UTR. Liu N, et al. Genes Dev, 2009 Dec 1. PMID 19952109.
    2. Identifying candidate genes affecting developmental time in Drosophila melanogaster: pervasive pleiotropy and gene-by-environment interaction. Mensch J, et al. BMC Dev Biol, 2008 Aug 8. PMID 18687152.
    3. Global analysis of mRNA localization reveals a prominent role in organizing cellular architecture and function. Lécuyer E, et al. Cell, 2007 Oct 5. PMID 17923096.
    4. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    5. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.

    See all (22) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Help top of page

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:59928 BioGRID:61402 CG10395    BioGRID  PubMed Two-hybrid 
    BioGRID:59928 BioGRID:65701 CG11449    BioGRID  PubMed Two-hybrid 
    BioGRID:59928 BioGRID:64968 CG13458    BioGRID  PubMed Two-hybrid 
    BioGRID:59928 BioGRID:64931 CG13476    BioGRID  PubMed Two-hybrid 
    BioGRID:59928 BioGRID:59396 CG1678    BioGRID  PubMed Two-hybrid 
    BioGRID:59928 BioGRID:57795 CG2709    BioGRID  PubMed Two-hybrid 
    BioGRID:59928 BioGRID:57935 CG32772    BioGRID  PubMed Two-hybrid 
    BioGRID:59928 BioGRID:64758 CG4328    BioGRID  PubMed Two-hybrid 
    BioGRID:59928 BioGRID:60200 CG7164    BioGRID  PubMed Two-hybrid 
    BioGRID:59928 BioGRID:65639 CG7172    BioGRID  PubMed Two-hybrid 
    BioGRID:59928 BioGRID:65440 CG7757    BioGRID  PubMed Two-hybrid 
    BioGRID:59928 BioGRID:68418 CG7920    BioGRID  PubMed Two-hybrid 
    BioGRID:59928 BioGRID:65766 CG9795    BioGRID  PubMed Two-hybrid 
    BioGRID:59928 BioGRID:67217 Dlc90F    BioGRID  PubMed Two-hybrid 
    BioGRID:59928 BioGRID:61650 Mlh1    BioGRID  PubMed Two-hybrid 
    BioGRID:59928 BioGRID:60686 Rab6    BioGRID  PubMed Two-hybrid 
    BioGRID:59928 BioGRID:60947 Tektin-A    BioGRID  PubMed Two-hybrid 
    BioGRID:59928 BioGRID:62900 betaTub56D    BioGRID  PubMed Two-hybrid 
    BioGRID:59928 BioGRID:70925 crc    BioGRID  PubMed Two-hybrid 
    BioGRID:59928 BioGRID:64940 gnu    BioGRID  PubMed Two-hybrid 
    BioGRID:59928 BioGRID:61230 msb1l    BioGRID  PubMed Two-hybrid 
    BioGRID:59928 BioGRID:65209 rogdi    BioGRID  PubMed Two-hybrid 
    Help top of page

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
    		  
    Help top of page

    General protein information

    Preferred Names
    CG14025 gene product from transcript CG14025-RA
    Names
    Blastoderm-specific gene 25D
    Bsg25D-PA
    Bsg25D-PB
    Bsg25D-PC
    Bsg25D-PD
    Bsg25D-PE
    CG14025-PA
    CG14025-PB
    CG14025-PC
    CG14025-PD
    CG14025-PE
    Help top of page

    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.4

      Range
      5271728..5278558, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_057568.5 → NP_476916.3  Blastoderm-specific gene 25D, isoform A [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P11929
      Related
      FBpp0078717
      Conserved Domains (1) summary
      TIGR02168
      Location:540 – 675
      Blast Score: 102
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    2. NM_001201770.1 → NP_001188699.1  Blastoderm-specific gene 25D, isoform E [Drosophila melanogaster]

      Status: REVIEWED

      Conserved Domains (1) summary
      TIGR02168
      Location:586 – 762
      Blast Score: 107
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    3. NM_164637.2 → NP_723072.1  Blastoderm-specific gene 25D, isoform B [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VMS6
      Related
      FBpp0078718
      Conserved Domains (1) summary
      TIGR02168
      Location:586 – 762
      Blast Score: 108
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    4. NM_164638.2 → NP_723073.1  Blastoderm-specific gene 25D, isoform C [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IPK8
      Related
      FBpp0078719
      Conserved Domains (1) summary
      TIGR02168
      Location:527 – 703
      Blast Score: 106
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    5. NM_001201769.1 → NP_001188698.1  Blastoderm-specific gene 25D, isoform D [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      C9QPC2
      Conserved Domains (1) summary
      TIGR02168
      Location:568 – 703
      Blast Score: 102
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    Help top of page

    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014134.5 AAN10537.2
    genomic AE014134.5 ADV36949.1
    genomic AE014134.5 AAF52235.1
    mRNA AY095187.1 AAM12280.1
    genomic AE014134.5 AAN10536.1
    genomic AE014134.5 ADV36948.1
    mRNA BT100004.1 ACX54888.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    P11929.2 GenPept
    Help top of page

    Additional Links

    Gene LinkOut

      Supplemental Content