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    CG31679 [ Drosophila melanogaster ]

    Gene ID: 33404, updated on 4-Feb-2012
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    Summary

    Official Symbol
    CG31679provided by Flybase
    Primary source
    FLYBASE:FBgn0051679
    Locus tag
    Dmel_CG31679
    Gene type
    protein coding
    RNA name
    CG31679
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG17006; Dmel\CG31679
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    Genomic context

    Location :
    22D5-22D5
    Sequence :
    Chromosome: 2L; NT_033779.4 (2237076..2238251, complement)
    See CG31679 in Epigenomics, MapViewer

    Chromosome 2L - NT_033779.4Genomic Context describing neighboring genes Neighboring gene CG15387 gene product from transcript CG15387-RA Neighboring gene lethal (2) s5379 Neighboring gene ghost Neighboring gene CG32463 gene product from transcript CG32463-RA Neighboring gene CG31682 gene product from transcript CG31682-RA

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    2. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    3. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    4. A Drosophila protein-interaction map centered on cell-cycle regulators. Stanyon CA, et al. Genome Biol, 2004. PMID 15575970.
    5. Heterochromatic sequences in a Drosophila whole-genome shotgun assembly. Hoskins RA, et al. Genome Biol, 2002. PMID 12537574.

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:59632 BioGRID:67008 Akt1    BioGRID  PubMed Two-hybrid 
    BioGRID:59632 BioGRID:64801 Atg1    BioGRID  PubMed Two-hybrid 
    BioGRID:59632 BioGRID:57560 CG13373    BioGRID  PubMed Two-hybrid 
    BioGRID:59632 BioGRID:61707 CG14744    BioGRID  PubMed Two-hybrid 
    BioGRID:59632 BioGRID:61339 CG9248    BioGRID  PubMed Two-hybrid 
    BioGRID:59632 BioGRID:62567 Cdk4    BioGRID  PubMed Two-hybrid 
    BioGRID:59632 BioGRID:62461 Cdk5    BioGRID  PubMed Two-hybrid 
    BioGRID:59632 BioGRID:64701 CycA    BioGRID  PubMed Two-hybrid 
    BioGRID:59632 BioGRID:58898 CycD    BioGRID  PubMed Two-hybrid 
    BioGRID:59632 BioGRID:68567 CycG    BioGRID  PubMed Two-hybrid 
    BioGRID:59632 BioGRID:61336 E2f2    BioGRID  PubMed Two-hybrid 
    BioGRID:59632 BioGRID:61322 RPA2    BioGRID  PubMed Two-hybrid 
    BioGRID:59632 BioGRID:65629 SAK    BioGRID  PubMed Two-hybrid 
    BioGRID:59632 BioGRID:67396 Sirt2    BioGRID  PubMed Two-hybrid 
    BioGRID:59632 BioGRID:61001 grp    BioGRID  PubMed Two-hybrid 
    BioGRID:59632 BioGRID:68673 nej    BioGRID  PubMed Two-hybrid 
    BioGRID:59632 BioGRID:61701 ptc    BioGRID  PubMed Two-hybrid 
    BioGRID:59632 BioGRID:65883 rev7    BioGRID  PubMed Two-hybrid 
    BioGRID:59632 BioGRID:77769 squ    BioGRID  PubMed Two-hybrid 
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    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    endodeoxyribonuclease activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    mitochondrion ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
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    General protein information

    Preferred Names
    CG31679 gene product from transcript CG31679-RA
    Names
    CG31679
    CG31679-PA
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.4

      Range
      2237076..2238251, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_134816.3 → NP_608660.3  CG31679 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VQ95
      Related
      FBpp0077486
      Conserved Domains (2) summary
      smart00892
      Location:125 – 294
      Blast Score: 246
      Endonuclease_NS; DNA/RNA non-specific endonuclease
      cl00089
      Location:113 – 292
      Blast Score: 175
      NUC; DNA/RNA non-specific endonuclease; prokaryotic and eukaryotic double- and single-stranded DNA and RNA endonucleases also present in phosphodiesterases. They exists as monomers and homodimers.
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014134.5 AAF51282.3
    mRNA BT011513.1 AAS15649.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    Q9VQ95.1 GenPept
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    Additional Links

    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content