My NCBISign In

Display Settings:

Format

Send to:

Choose Destination

    cactin [ Drosophila melanogaster ]

    Gene ID: 33043, updated on 9-May-2012
    Help top of page

    Summary

    Official Symbol
    cactinprovided by Flybase
    Primary source
    FLYBASE:FBgn0031114
    Locus tag
    Dmel_CG1676
    Gene type
    protein coding
    RNA name
    cactin
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG1676; Dmel\CG1676
    Help top of page

    Genomic context

    Location :
    19D1-19D1
    Sequence :
    Chromosome: X; NC_004354.3 (20295007..20297429)
    See cactin in Epigenomics, MapViewer

    Chromosome X - NC_004354.3Genomic Context describing neighboring genes Neighboring gene Odorant-binding protein 19c Neighboring gene Pheromone-binding protein-related protein 2 Neighboring gene Protein phosphatase 19C Neighboring gene CG15456 gene product from transcript CG15456-RA Neighboring gene CG11710 gene product from transcript CG11710-RA

    Help top of page

    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
    Helptop of page

    Bibliography

    Related articles in PubMed

    1. Conservation of the protein composition and electron microscopy structure of Drosophila melanogaster and human spliceosomal complexes. Herold N, et al. Mol Cell Biol, 2009 Jan. PMID 18981222.
    2. Drosophila MFAP1 is required for pre-mRNA processing and G2/M progression. Andersen DS, et al. J Biol Chem, 2008 Nov 7. PMID 18765666.
    3. Genomic analysis of adaptive differentiation in Drosophila melanogaster. Turner TL, et al. Genetics, 2008 May. PMID 18493064.
    4. Identification of novel modulators of mitochondrial function by a genome-wide RNAi screen in Drosophila melanogaster. Chen J, et al. Genome Res, 2008 Jan. PMID 18042644.
    5. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.

    See all (15) citations in PubMed

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Help top of page

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:59332 BioGRID:61402 CG10395    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:64777 CG10654    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:62873 CG11906    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:64968 CG13458    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:59864 CG15631    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:60821 CG16865    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:62243 CG17050    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:61182 CG17568    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:59177 CG18259    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:58219 CG2278    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:59784 CG3213    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:59866 CG3294    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:58073 CG3342    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:60574 CG43129    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:62713 CG5009    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:58835 CG6340    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:64172 CG7386    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:66319 CG8301    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:61931 Git    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:58290 HP1b    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:60112 Nha1    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:63381 PHDP    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:66344 Pnn    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:64408 Prm    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:63240 RpL23    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:64841 SNCF    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:60507 SmB    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:64432 Srp68    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:65180 TSG101    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:59522 aru    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:69909 bic    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:60980 cact    BioGRID  PubMed Phenotypic Enhancement 
    BioGRID:59332 BioGRID:57745 crn    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:57548 ewg    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:65581 ko    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:60786 loqs    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:59888 mRpL24    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:65286 mRpS26    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:58172 p115    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:64196 ple    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:57898 rb    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:59392 slgA    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:68764 trbl    BioGRID  PubMed Two-hybrid 
    BioGRID:59332 BioGRID:68196 wdb    BioGRID  PubMed Two-hybrid 
    Help top of page

    General gene information

    Homology

    • Homologs of the cactin gene: The cactin gene is conserved in human, chimpanzee, , dog, mouse, rat, chicken, mosquito, C.elegans, S.pombe, , N.crassa, and A.thaliana.

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    defense response NAS
    Non-traceable Author Statement
    more info
    		  
    dorsal/ventral axis specification IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    neurogenesis IMP
    Inferred from Mutant Phenotype
    more info
    		  
    nuclear mRNA splicing, via spliceosome IC
    Inferred by Curator
    more info
    		 PubMed 
    signal transduction NAS
    Non-traceable Author Statement
    more info
    		  
    Component Evidence Code Pubs
    catalytic step 2 spliceosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Help top of page

    General protein information

    Preferred Names
    CG1676 gene product from transcript CG1676-RA
    Names
    CG1676-PA
    cactin
    cactin-PA
    Help top of page

    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.3

      Range
      20295007..20297429
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_078698.3 → NP_523422.3  cactin [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VR99
      Related
      FBpp0076997
      Conserved Domains (2) summary
      pfam10312
      Location:284 – 477
      Blast Score: 543
      Cactin_mid; Conserved mid region of cactin
      cl10717
      Location:638 – 762
      Blast Score: 669
      CactinC_cactus; Cactus-binding C-terminus of cactin protein
    Help top of page

    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014298.4 AAF50904.2
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VR99.1 GenPept
    Help top of page

    Additional Links

    Gene LinkOut

      Supplemental Content