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    skpC [ Drosophila melanogaster ]

    Gene ID: 32996, updated on 21-Jan-2012

    Summary

    Official Symbol
    skpCprovided by Flybase
    Primary source
    FLYBASE:FBgn0026175
    Locus tag
    Dmel_CG11941
    Gene type
    protein coding
    RNA name
    skpC
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG11941; Dmel\CG11941; dskpC; Skp

    Genomic context

    Location :
    18F2-18F2
    Sequence :
    Chromosome: X; NC_004354.3 (19710171..19710647)
    See skpC in Epigenomics, MapViewer

    Chromosome X - NC_004354.3Genomic Context describing neighboring genes Neighboring gene vielfaltig Neighboring gene CG12700 gene product from transcript CG12700-RA Neighboring gene CG11942 gene product from transcript CG11942-RA Neighboring gene CG11940 gene product from transcript CG11940-RA

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:59291 BioGRID:62945 CG11055    BioGRID  PubMed Two-hybrid 
    BioGRID:59291 BioGRID:67185 CG14317    BioGRID  PubMed Two-hybrid 
    BioGRID:59291 BioGRID:57626 CG14627    BioGRID  PubMed Two-hybrid 
    BioGRID:59291 BioGRID:60644 CG14937    BioGRID  PubMed Two-hybrid 
    BioGRID:59291 BioGRID:61742 CG34350    BioGRID  PubMed Two-hybrid 
    BioGRID:59291 BioGRID:66989 CG4221    BioGRID  PubMed Two-hybrid 
    BioGRID:59291 BioGRID:61296 CG9316    BioGRID  PubMed Two-hybrid 
    BioGRID:59291 BioGRID:68867 RpS15Aa    BioGRID  PubMed Two-hybrid 
    BioGRID:59291 BioGRID:63196 RpS16    BioGRID  PubMed Two-hybrid 
    BioGRID:59291 BioGRID:61093 RpS26    BioGRID  PubMed Two-hybrid 
    BioGRID:59291 BioGRID:63307 eIF2B-delta    BioGRID  PubMed Two-hybrid 

    General gene information

    Pathways from BioSystems

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    CG11941 gene product from transcript CG11941-RA
    Names
    CG11941-PA
    skpC
    skpC-PA

    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.3

      Range
      19710171..19710647
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_134514.1NP_608358.1  skpC [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VWC4
      Related
      FBpp0074566, FBtr0074797
      Conserved Domains (2) summary
      pfam01466
      Location:87146
      Blast Score: 276
      Skp1; Skp1 family, dimerisation domain
      cl02518
      Location:6114
      Blast Score: 285
      BTB; BTB/POZ domain

    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014298.4 AAF49022.2
    genomic AF220068.1 AAF64676.1
    mRNA BT120007.1 ACZ94119.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    Q9VWC4.1 GenPept