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    Arpc3B [ Drosophila melanogaster ]

    Gene ID: 32696, updated on 10-May-2012
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    Summary

    Official Symbol
    Arpc3Bprovided by Flybase
    Primary source
    FLYBASE:FBgn0065032
    Locus tag
    Dmel_CG8936
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Arpc3; BcDNA:SD24339; CG8936; Dmel\CG8936; P21-ARC
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    Genomic context

    Location :
    15E3-15E3
    Sequence :
    Chromosome: X; NC_004354.3 (16998604..16999885, complement)
    See Arpc3B in Epigenomics, MapViewer

    Chromosome X - NC_004354.3Genomic Context describing neighboring genes Neighboring gene CG16700 gene product from transcript CG16700-RA Neighboring gene CG4991 gene product from transcript CG4991-RB Neighboring gene CG5004 gene product from transcript CG5004-RA Neighboring gene meiotic 218 Neighboring gene CG33935 gene product from transcript CG33935-RC

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Genomic profiling and expression studies reveal both positive and negative activities for the Drosophila Myb MuvB/dREAM complex in proliferating cells. Georlette D, et al. Genes Dev, 2007 Nov 15. PMID 17978103.
    2. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    3. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    4. Drosophila ribosomal proteins are associated with linker histone H1 and suppress gene transcription. Ni JQ, et al. Genes Dev, 2006 Jul 15. PMID 16816001.
    5. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.

    See all (16) citations in PubMed

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:59027 BioGRID:65925 CG10979    BioGRID  PubMed Two-hybrid 
    BioGRID:59027 BioGRID:60093 CG11327    BioGRID  PubMed Two-hybrid 
    BioGRID:59027 BioGRID:64711 CG14126    BioGRID  PubMed Two-hybrid 
    BioGRID:59027 BioGRID:58851 CG15646    BioGRID  PubMed Two-hybrid 
    BioGRID:59027 BioGRID:58548 CG2025    BioGRID  PubMed Two-hybrid 
    BioGRID:59027 BioGRID:62590 CG5522    BioGRID  PubMed Two-hybrid 
    BioGRID:59027 BioGRID:66985 glob1    BioGRID  PubMed Two-hybrid 
    BioGRID:59027 BioGRID:69126 lola    BioGRID  PubMed Two-hybrid 
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    General gene information

    Homology

    • Homologs of the Arpc3B gene: The Arpc3B gene is conserved in human, chimpanzee, , dog, cow, mouse, rat, chicken, zebrafish, mosquito, C.elegans, S.cerevisiae, K.lactis, S.pombe, , N.crassa, A.thaliana, and rice.

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    actin binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    structural constituent of cytoskeleton NAS
    Non-traceable Author Statement
    more info
    		  
    Process Evidence Code Pubs
    actin filament organization NAS
    Non-traceable Author Statement
    more info
    		  
    regulation of actin filament polymerization IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    Arp2/3 protein complex NAS
    Non-traceable Author Statement
    more info
    		  
    cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		  
    germline ring canal IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
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    General protein information

    Preferred Names
    CG8936 gene product from transcript CG8936-RA
    Names
    Arpc3B
    Arpc3B-PA
    Arpc3B-PB
    CG8936-PA
    CG8936-PB
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.3

      Range
      16998604..16999885, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_132965.2 → NP_573193.1  Arpc3B, isoform A [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VX82
      Related
      FBpp0074184
      Conserved Domains (1) summary
      pfam04062
      Location:1 – 169
      Blast Score: 771
      P21-Arc; ARP2/3 complex ARPC3 (21 kDa) subunit

    2. NM_001103539.2 → NP_001097009.1  Arpc3B, isoform B [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8JV29
      Related
      FBpp0112388
      Conserved Domains (1) summary
      pfam04062
      Location:1 – 152
      Blast Score: 711
      P21-Arc; ARP2/3 complex ARPC3 (21 kDa) subunit
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    mRNA AY119268.1 AAM51128.1
    genomic AE014298.4 AAF48696.1
    genomic AE014298.4 ABW09439.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VX82.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content