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    CG4653 [ Drosophila melanogaster ]

    Gene ID: 32650, updated on 9-May-2012
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    Summary

    Official Symbol
    CG4653provided by Flybase
    Primary source
    FLYBASE:FBgn0030776
    Locus tag
    Dmel_CG4653
    Gene type
    protein coding
    RNA name
    CG4653
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG4653; SPH179
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    Genomic context

    Location :
    15A3-15A3
    Sequence :
    Chromosome: X; NC_004354.3 (16598114..16599311)
    See CG4653 in Epigenomics, MapViewer

    Chromosome X - NC_004354.3Genomic Context describing neighboring genes Neighboring gene CG4678 gene product from transcript CG4678-RE Neighboring gene CG9675 gene product from transcript CG9675-RA Neighboring gene CG9673 gene product from transcript CG9673-RA Neighboring gene CG9672 gene product from transcript CG9672-RA Neighboring gene CG13008 gene product from transcript CG13008-RA

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Enhanced function annotations for Drosophila serine proteases: a case study for systematic annotation of multi-member gene families. Shah PK, et al. Gene, 2008 Jan 15. PMID 17996400.
    2. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    3. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    4. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    5. Protein interaction mapping: a Drosophila case study. Formstecher E, et al. Genome Res, 2005 Mar. PMID 15710747.

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:58986 BioGRID:60055 CG9527    BioGRID  PubMed Two-hybrid 
    BioGRID:58986 BioGRID:62441 Pms2    BioGRID  PubMed Two-hybrid 
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    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    NOT serine-type endopeptidase activity NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Preferred Names
    CG4653 gene product from transcript CG4653-RA
    Names
    CG4653
    CG4653-PA
    NP_573150.2
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.3

      Range
      16598114..16599311
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_132922.3 → NP_573150.2  CG4653 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VXC6
      Related
      FBpp0074095
      Conserved Domains (1) summary
      cd00190
      Location:30 – 252
      Blast Score: 394
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014298.4 AAF48650.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VXC6.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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