My NCBISign In

Display Settings:

Format

Send to:

Choose Destination

    Traf-like TNF-receptor-associated factor-like [ Drosophila melanogaster ]

    Gene ID: 32611, updated on 9-May-2012
    Help top of page

    Summary

    Official Symbol
    Traf-likeprovided by Flybase
    Official Full Name
    TNF-receptor-associated factor-likeprovided by Flybase
    Primary source
    FLYBASE:FBgn0030748
    Locus tag
    Dmel_CG4394
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG4394; Dmel\CG4394; dTRAF3; Traf-related; Traf3; TRAF3
    Help top of page

    Genomic context

    Location :
    14C4-14C4
    Sequence :
    Chromosome: X; NC_004354.3 (16309102..16311618)
    See Traf-like in Epigenomics, MapViewer

    Chromosome X - NC_004354.3Genomic Context describing neighboring genes Neighboring gene CG9981 gene product from transcript CG9981-RA Neighboring gene CG4301 gene product from transcript CG4301-RC Neighboring gene Annexin B11 Neighboring gene hangover Neighboring gene CG9947 gene product from transcript CG9947-RA

    Help top of page

    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
    Helptop of page

    Bibliography

    Related articles in PubMed

    1. X-linked variation in immune response in Drosophila melanogaster. Hill-Burns EM, et al. Genetics, 2009 Dec. PMID 19822734.
    2. RNAi screening in Drosophila cells identifies new modifiers of mutant huntingtin aggregation. Doumanis J, et al. PLoS One, 2009 Sep 30. PMID 19789644.
    3. Systems genetics of complex traits in Drosophila melanogaster. Ayroles JF, et al. Nat Genet, 2009 Mar. PMID 19234471.
    4. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    5. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.

    See all (18) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Help top of page

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:58951 BioGRID:69879 Aats-val    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:64200 CG10103    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:65591 CG10508    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:58692 CG11178    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:59462 CG11911    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:59058 CG12432    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:59096 CG12985    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:60404 CG13124    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:68496 CG1340    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:67849 CG13622    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:67620 CG13843    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:62958 CG13871    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:533580 CG14425    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:68045 CG14540    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:68044 CG14546    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:64286 CG14837    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:62906 CG15120    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:59674 CG15395    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:60755 CG15482    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:68390 CG15514    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:68509 CG15546    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:59864 CG15631    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:63070 CG15666    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:62243 CG17050    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:61186 CG17564    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:65882 CG2926    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:57913 CG3062    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:57912 CG3081    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:68397 CG31036    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:65531 CG32425    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:63476 CG3492    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:60923 CG4161    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:62572 CG5089    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:61068 CG5674    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:68159 CG6059    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:64646 CG6163    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:66935 CG6171    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:59153 CG6470    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:58854 CG8128    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:66319 CG8301    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:62509 CG8435    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:60245 CG8455    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:59785 CG8851    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:62884 CG9975    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:65035 CkIIalpha-i1    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:68940 Crtp    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:64171 D19A    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:68166 DNApol-alpha73    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:64332 ERR    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:64410 Fhos    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:61858 Fmrf    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:67526 GABA-B-R2    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:67047 Gyc-89Db    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:65058 Hip14    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:62594 IntS8    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:66317 Kap-alpha3    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:71956 Mbs    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:66046 Mlp84B    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:58080 Pat1    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:66344 Pnn    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:68008 RASSF8    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:63961 Rcd5    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:65509 RhoBTB    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:62684 RhoGAP54D    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:65943 Rm62    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:65863 RpL35A    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:78269 RpL38    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:67703 RpS3    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:62561 Syn2    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:70851 aPKC    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:66045 alphaTub84B    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:63159 ari-2    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:60088 cup    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:61832 dap    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:60919 esg    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:66435 fau    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:64940 gnu    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:61618 nito    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:62764 nopo    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:57644 png    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:65125 roq    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:63955 scrt    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:64015 slow    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:68777 sol    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:64787 sowah    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:70682 term    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:66636 trus    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:58695 tth    BioGRID  PubMed Two-hybrid 
    BioGRID:58951 BioGRID:60116 wee    BioGRID  PubMed Two-hybrid 
    Help top of page

    General gene information

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    defense response ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    signal transduction ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Help top of page

    General protein information

    Preferred Names
    CG4394 gene product from transcript CG4394-RC
    Names
    CG4394-PA
    CG4394-PB
    CG4394-PC
    CG4394-PD
    CG4394-PE
    TNF-receptor-associated factor-like
    Traf-like-PA
    Traf-like-PB
    Traf-like-PC
    Traf-like-PD
    Traf-like-PE
    Traf3
    Help top of page

    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.3

      Range
      16309102..16311618
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_132898.3 → NP_573126.1  TNF-receptor-associated factor-like, isoform C [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q960H6
      Related
      FBpp0074049
      Conserved Domains (2) summary
      cd00270
      Location:312 – 451
      Blast Score: 372
      MATH_TRAF_C; Tumor Necrosis Factor Receptor (TNFR)-Associated Factor (TRAF) family, TRAF domain, C-terminal MATH subdomain; TRAF molecules serve as adapter proteins that link cell surface TNFRs and receptors of the interleukin-1/Toll-like family to downstream kinase ...
      TIGR02168
      Location:96 – 308
      Blast Score: 109
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    2. NM_001258785.1 → NP_001245714.1  TNF-receptor-associated factor-like, isoform E [Drosophila melanogaster]

      Status: REVIEWED

    3. NM_001258784.1 → NP_001245713.1  TNF-receptor-associated factor-like, isoform D [Drosophila melanogaster]

      Status: REVIEWED

    4. NM_167518.2 → NP_727977.1  TNF-receptor-associated factor-like, isoform B [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VXG5
      Related
      FBpp0074050
      Conserved Domains (2) summary
      cd00270
      Location:255 – 394
      Blast Score: 375
      MATH_TRAF_C; Tumor Necrosis Factor Receptor (TNFR)-Associated Factor (TRAF) family, TRAF domain, C-terminal MATH subdomain; TRAF molecules serve as adapter proteins that link cell surface TNFRs and receptors of the interleukin-1/Toll-like family to downstream kinase ...
      TIGR02168
      Location:39 – 251
      Blast Score: 102
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    5. NM_167517.2 → NP_727976.1  TNF-receptor-associated factor-like, isoform A [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IR14
      Related
      FBpp0074051
      Conserved Domains (2) summary
      cd00270
      Location:334 – 473
      Blast Score: 374
      MATH_TRAF_C; Tumor Necrosis Factor Receptor (TNFR)-Associated Factor (TRAF) family, TRAF domain, C-terminal MATH subdomain; TRAF molecules serve as adapter proteins that link cell surface TNFRs and receptors of the interleukin-1/Toll-like family to downstream kinase ...
      TIGR02168
      Location:118 – 330
      Blast Score: 107
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    Help top of page

    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014298.4 AAF48608.2
    mRNA AY052057.1 AAK93481.1
    genomic AE014298.4 AFH07427.1
    genomic AE014298.4 AFH07426.1
    genomic AE014298.4 AAF48607.1
    mRNA BT125880.1 ADV15459.1
    genomic AE014298.4 AAN09408.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q960H6.1 GenPept
    Help top of page

    Additional Links

    Gene LinkOut

      Supplemental Content

      Recent activity

      Clear Turn Off Turn On

      Your browsing activity is empty.

      Activity recording is turned off.

      Turn recording back on

      See more...