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CNF04250 expressed protein [ Cryptococcus neoformans var. neoformans JEC21 ]

Gene ID: 3258177, updated on 31-Jan-2024

Summary

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Gene symbol
CNF04250
Gene description
expressed protein
Locus tag
CNF04250
Gene type
protein coding
RNA name
expressed protein
RefSeq status
PROVISIONAL
Organism
Cryptococcus neoformans var. neoformans JEC21 (strain: JEC21, serotype: D)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
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Genomic context

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Location:
chromosome: 6
Exon count:
21
Sequence:
Chromosome: 6; NC_006691.1 (1233509..1237079, complement)

Chromosome 6 - NC_006691.1Genomic Context describing neighboring genes Neighboring gene expressed protein Neighboring gene hypothetical protein Neighboring gene oxysterol binding protein, putative Neighboring gene tRNA-Thr Neighboring gene ubiquitin conjugating enzyme, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006691.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Loftus BJ, et al. Science, 2005 Feb 25. PMID 15653466, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
expressed protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006691.1 Reference assembly

    Range
    1233509..1237079 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024657452.1 → XP_024513150.1  expressed protein [Cryptococcus neoformans var. neoformans JEC21]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A854Q8F5, Q5KEU1
    Conserved Domains (3) summary
    cd10316
    Location:360 → 442
    RGL4_M; Middle domain of rhamnogalacturonan lyase, a family 4 polysaccharide lyase
    cd10320
    Location:24 → 328
    RGL4_N; N-terminal catalytic domain of rhamnogalacturonan lyase, a family 4 polysaccharide lyase
    cl15687
    Location:463 → 675
    RGL4_C; C-terminal domain of rhamnogalacturonan lyase, a family 4 polysaccharide lyase
Nucleotide Protein
Heading Accession and Version

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