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CNL05080 conserved hypothetical protein [ Cryptococcus neoformans var. neoformans JEC21 ]

Gene ID: 3255009, updated on 23-Oct-2023

Summary

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Gene symbol
CNL05080
Gene description
conserved hypothetical protein
Locus tag
CNL05080
Gene type
protein coding
RNA name
conserved hypothetical protein
RefSeq status
PROVISIONAL
Organism
Cryptococcus neoformans var. neoformans JEC21 (strain: JEC21, serotype: D)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
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Genomic context

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See CNL05080 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
9
Sequence:
Chromosome: 12; NC_006681.1 (424320..427307)

Chromosome 12 - NC_006681.1Genomic Context describing neighboring genes Neighboring gene conserved hypothetical protein Neighboring gene hypothetical protein Neighboring gene Aldehyde dehydrogenase (ALDDH), putative Neighboring gene expressed protein Neighboring gene conserved hypothetical protein Neighboring gene pseudo Neighboring gene expressed protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006681.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Loftus BJ, et al. Science, 2005 Feb 25. PMID 15653466, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006681.1 Reference assembly

    Range
    424320..427307
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_568224.2 → XP_568224.1  conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]

    See identical proteins and their annotated locations for XP_568224.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q5K8N1
    Conserved Domains (2) summary
    cd12148
    Location:134 → 538
    fungal_TF_MHR; fungal transcription factor regulatory middle homology region
    smart00066
    Location:13 → 61
    GAL4; GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain
Nucleotide Protein
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