slc35b4 solute carrier family 35 member B4 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: slc35b4provided by ZNC
Official Full Name: solute carrier family 35 member B4provided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-2457
See related: Ensembl:ENSDARG00000071087 AllianceGenome:ZFIN:ZDB-GENE-030131-2457
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fc08c12; fc29f04; fi03h11; zgc:55288; wu:fc08c12; wu:fc29f04; wu:fi03h11
Summary: Predicted to enable UDP-N-acetylglucosamine transmembrane transporter activity and UDP-xylose transmembrane transporter activity. Predicted to act upstream of or within carbohydrate transport and transmembrane transport. Predicted to be located in Golgi apparatus and membrane. Predicted to be integral component of membrane. Predicted to be integral component of Golgi membrane and integral component of endoplasmic reticulum membrane. Is expressed in intestinal bulb and notochord. Orthologous to human SLC35B4 (solute carrier family 35 member B4). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 25

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	25	NC_007136.7 (3347479..3357945)
105	previous assembly	GRCz10 (GCF_000002035.5)	25	NC_007136.6 (3221771..3232201)

Chromosome 25 - NC_007136.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fc29f04.x1 (e-PCR)
- UniSTS:187917

fc08c12.x1 (e-PCR)
- UniSTS:187720

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables UDP-N-acetylglucosamine transmembrane transporter activity	IBA Inferred from Biological aspect of Ancestor more info
enables UDP-xylose transmembrane transporter activity	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in UDP-N-acetylglucosamine transmembrane transport	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within carbohydrate transport	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within transmembrane transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in Golgi apparatus	IEA Inferred from Electronic Annotation more info
is_active_in Golgi membrane	IBA Inferred from Biological aspect of Ancestor more info
is_active_in endoplasmic reticulum membrane	IBA Inferred from Biological aspect of Ancestor more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: UDP-xylose and UDP-N-acetylglucosamine transporter

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.