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    DET0446 [Fe] hydrogenase, HymA subunit [ Dehalococcoides ethenogenes 195 ]

    Gene ID: 3230213, updated on 18-May-2013
    Gene symbol
    DET0446
    Gene description
    [Fe] hydrogenase, HymA subunit
    Locus tag
    DET0446
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Dehalococcoides ethenogenes 195 (strain: 195, old-name: Dehalococcoides ethenogenes str. 195)
    Lineage
    Bacteria; Chloroflexi; Dehalococcoidetes; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides
    Sequence :
    NC_002936.3 (422803..423267, complement)

    NC_002936.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene holo-ACP synthase Neighboring gene acyl CoA biotin-dependent carboxyltransferase Neighboring gene 3-isopropylmalate dehydratase large subunit Neighboring gene 3-isopropylmalate dehydratase small subunit

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides ethenogenes. Seshadri R, et al. Science, 2005 Jan 7. PMID 15637277.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction

    Gene Ontology Provided by TIGR

    Function Evidence Code Pubs
    electron carrier activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    ferredoxin hydrogenase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    ferredoxin hydrogenase complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Names
    [Fe] hydrogenase, HymA subunit
    YP_181190.1
    • identified by similarity to GP:2865515

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002936.3

      Range
      422803..423267, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_181190.1 [Fe] hydrogenase, HymA subunit [Dehalococcoides ethenogenes 195]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q3Z9A9
      Conserved Domains (2) summary
      pfam01257
      Location:16 – 153
      Blast Score: 463
      Complex1_24kDa; Respiratory-chain NADH dehydrogenase 24 Kd subunit
      cd03064
      Location:74 – 151
      Blast Score: 281
      TRX_Fd_NuoE; TRX-like [2Fe-2S] Ferredoxin (Fd) family, NADH:ubiquinone oxidoreductase (Nuo) subunit E subfamily; Nuo, also called respiratory chain Complex 1, is the entry point for electrons into the respiratory chains of bacteria and the mitochondria of eukaryotes. ...
    Nucleotide Protein
    Heading Accession and Version
    genomic CP000027.1 AAW40249.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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