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sult6b1 sulfotransferase family, cytosolic, 6b, member 1 [ Danio rerio (zebrafish) ]

Gene ID: 322462, updated on 27-Mar-2024

Summary

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Official Symbol
sult6b1provided by ZNC
Official Full Name
sulfotransferase family, cytosolic, 6b, member 1provided by ZNC
Primary source
ZFIN:ZDB-GENE-050417-228
See related
Ensembl:ENSDARG00000086826 AllianceGenome:ZFIN:ZDB-GENE-050417-228
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
sb:cb89; wu:fb62a12; zgc:111843
Summary
Enables sulfotransferase activity. Acts upstream of or within cellular response to xenobiotic stimulus. Predicted to be active in cytoplasm. Is expressed in several structures, including EVL; digestive system; ectoderm; forerunner cell group; and tail bud. Orthologous to human SULT6B1 (sulfotransferase family 6B member 1). [provided by Alliance of Genome Resources, Apr 2022]
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See sult6b1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
7
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 11 NC_007122.7 (43375428..43387747)
105 previous assembly GRCz10 (GCF_000002035.5) 11 NC_007122.6 (43083167..43095486)

Chromosome 11 - NC_007122.7Genomic Context describing neighboring genes Neighboring gene spectrin, beta, non-erythrocytic 1 Neighboring gene uncharacterized LOC108191668 Neighboring gene solute carrier family 29 member 1b Neighboring gene vasoactive intestinal peptide b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Molecular cloning, expression, and functional characterization of a novel zebrafish cytosolic sulfotransferase. Sugahara T, et al. Biochem Biophys Res Commun, 2003 Jan 17. PMID 12507510
  2. Identification and characterization of two novel cytosolic sulfotransferases, SULT1 ST7 and SULT1 ST8, from zebrafish. Liu TA, et al. Aquat Toxicol, 2008 Aug 29. PMID 18632167
  3. Host monitoring of quorum sensing during Pseudomonas aeruginosa infection. Moura-Alves P, et al. Science, 2019 Dec 20. PMID 31857448
  4. Down-Regulation of hspb9 and hspb11 Contributes to Wavy Notochord in Zebrafish Embryos Following Exposure to Polychlorinated Diphenylsulfides. Zhang R, et al. Environ Sci Technol, 2018 Nov 6. PMID 30335980
  5. Structurally distinct polycyclic aromatic hydrocarbons induce differential transcriptional responses in developing zebrafish. Goodale BC, et al. Toxicol Appl Pharmacol, 2013 Nov 1. PMID 23656968, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. results constitute a first study on the cloning, expression, and characterization of a zebrafish cytosolic sulfotransferase
    Title: Molecular cloning, expression, and functional characterization of a novel zebrafish cytosolic sulfotransferase.
Submit: New GeneRIF Correction

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables sulfotransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables sulfotransferase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within cellular response to xenobiotic stimulus IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in sulfation IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytosol IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
sulfotransferase 6B1
Names
thyroxine sulfotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_214686.2 → NP_999851.2  sulfotransferase 6B1

    Status: VALIDATED

    Source sequence(s)
    CU929458
    UniProtKB/Swiss-Prot
    F1QYJ6, Q567N1, Q800X2
    Related
    ENSDARP00000105990.1, ENSDART00000130131.4
    Conserved Domains (1) summary
    pfam00685
    Location:48 → 283
    Sulfotransfer_1; Sulfotransferase domain

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007122.7 Reference GRCz11 Primary Assembly

    Range
    43375428..43387747
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F1QYJ6.1 GenPept UniProtKB/Swiss-Prot:F1QYJ6

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.