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Apba1 amyloid beta (A4) precursor protein binding, family A, member 1 [ Mus musculus (house mouse) ]

Gene ID: 319924, updated on 8-May-2016
Official Symbol
Apba1provided by MGI
Official Full Name
amyloid beta (A4) precursor protein binding, family A, member 1provided by MGI
Primary source
MGI:MGI:1860297
See related
Ensembl:ENSMUSG00000024897
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
X11; Mint; Mint1; Lin-10; Urop11; X11alpha; 6430513E09Rik
Orthologs
Location:
19; 19 B
Exon count:
13
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 19 NC_000085.6 (23758876..23949598)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (23833366..24024087)

Chromosome 19 - NC_000085.6Genomic Context describing neighboring genes Neighboring gene SAP domain containing ribonucleoprotein pseudogene Neighboring gene protein prenyltransferase alpha subunit repeat containing 1 Neighboring gene predicted gene, 34076 Neighboring gene family with sequence similarity 189, member A2 Neighboring gene predicted gene, 41822 Neighboring gene predicted gene, 41823

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
PDZ domain binding ISO
Inferred from Sequence Orthology
more info
 
beta-amyloid binding ISO
Inferred from Sequence Orthology
more info
 
phosphatidylinositol-4,5-bisphosphate binding ISO
Inferred from Sequence Orthology
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
protein complex binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
gamma-aminobutyric acid secretion IMP
Inferred from Mutant Phenotype
more info
PubMed 
glutamate secretion IGI
Inferred from Genetic Interaction
more info
PubMed 
in utero embryonic development IGI
Inferred from Genetic Interaction
more info
PubMed 
intracellular protein transport IPI
Inferred from Physical Interaction
more info
PubMed 
locomotory behavior IGI
Inferred from Genetic Interaction
more info
PubMed 
multicellular organism growth IGI
Inferred from Genetic Interaction
more info
PubMed 
protein complex assembly IEA
Inferred from Electronic Annotation
more info
 
protein transport IEA
Inferred from Electronic Annotation
more info
 
regulation of gene expression IGI
Inferred from Genetic Interaction
more info
PubMed 
synaptic transmission IGI
Inferred from Genetic Interaction
more info
PubMed 
synaptic transmission IMP
Inferred from Mutant Phenotype
more info
PubMed 
transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
dendritic spine ISO
Inferred from Sequence Orthology
more info
 
membrane IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 
plasma membrane ISO
Inferred from Sequence Orthology
more info
 
protein complex ISO
Inferred from Sequence Orthology
more info
 
synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
amyloid beta A4 precursor protein-binding family A member 1
Names
UROP11-110
adapter protein X11alpha
mint-1
neuron-specific X11 protein
neuronal Munc18-1-interacting protein 1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_177034.3NP_796008.2  amyloid beta A4 precursor protein-binding family A member 1

    See identical proteins and their annotated locations for NP_796008.2

    Status: VALIDATED

    Source sequence(s)
    AI838602, AK032261, AK147583, CJ122547
    Consensus CDS
    CCDS50407.1
    UniProtKB/Swiss-Prot
    B2RUJ5
    Related
    ENSMUSP00000025830, ENSMUST00000025830
    Conserved Domains (2) summary
    cd00992
    Location:750823
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd01208
    Location:457628
    PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000085.6 Reference GRCm38.p3 C57BL/6J

    Range
    23758876..23949598
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006527139.2XP_006527202.1  

    See identical proteins and their annotated locations for XP_006527202.1

    UniProtKB/Swiss-Prot
    B2RUJ5
    Conserved Domains (2) summary
    cd00992
    Location:750823
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd01208
    Location:457628
    PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
  2. XM_006527140.2XP_006527203.1  

    UniProtKB/Swiss-Prot
    B2RUJ5
    Conserved Domains (2) summary
    cd00992
    Location:739812
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd01208
    Location:457617
    PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain

Alternate Mm_Celera

Genomic

  1. AC_000041.1 Alternate Mm_Celera

    Range
    24515896..24708645
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)