Hist1h2bf histone cluster 1, H2bf [Mus musculus] - Gene

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Summary

Official Symbol: Hist1h2bfprovided by MGI
Official Full Name: histone cluster 1, H2bfprovided by MGI
Primary source: MGI:2448383
See related: Ensembl:ENSMUSG00000069268; Vega:OTTMUSG00000000558
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus

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Genomic context

Location :: 13 A2-A3; 13

Sequence :: Chromosome: 13; NC_000079.6 (23573810..23574190, complement)

See Hist1h2bf in Epigenomics, MapViewer

Chromosome 13 - NC_000079.6 Genomic Context describing neighboring genes

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Genomic regions, transcripts, and products

Genomic Sequence

Go to nucleotideGraphics FASTA GenBank

Go to reference sequence details

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Bibliography

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Submit: New GeneRIF Correction

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General gene information

Markers

Hist1h2bc (e-PCR), detects polymorphism
- UniSTS:259084

NoName (e-PCR)
- UniSTS:487787

NoName (e-PCR)
- UniSTS:488585

NoName (e-PCR)
- UniSTS:492971

NoName (e-PCR)
- UniSTS:493006

Homology

Homologs of the Hist1h2bf gene: The Hist1h2bf gene is conserved in human, chimpanzee, , cow, and rat.

Pathways from BioSystems

Alcoholism, organism-specific biosystem (from KEGG)
Alcoholism, organism-specific biosystemAlcoholism, also called dependence on alcohol (ethanol), is a chronic relapsing disorder that is progressive and has serious detrimental health outcomes. As one of the primary mediators of the reward...
Alcoholism, conserved biosystem (from KEGG)
Alcoholism, conserved biosystemAlcoholism, also called dependence on alcohol (ethanol), is a chronic relapsing disorder that is progressive and has serious detrimental health outcomes. As one of the primary mediators of the reward...
Circadian Exercise, organism-specific biosystem (from WikiPathways)
Circadian Exercise, organism-specific biosystem
Circadian Exercise
Systemic lupus erythematosus, organism-specific biosystem (from KEGG)
Systemic lupus erythematosus, organism-specific biosystemSystemic lupus erythematosus (SLE) is a prototypic autoimmune disease characterised by the production of IgG autoantibodies that are specific for self-antigens, such as DNA, nuclear proteins and cert...
Systemic lupus erythematosus, conserved biosystem (from KEGG)
Systemic lupus erythematosus, conserved biosystemSystemic lupus erythematosus (SLE) is a prototypic autoimmune disease characterised by the production of IgG autoantibodies that are specific for self-antigens, such as DNA, nuclear proteins and cert...

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General protein information

Preferred Names: histone H2B type 1-F/J/L

Names: histone H2B type 1-F/J/L; H2B 291A; histone 1, H2bf

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NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_178195.1 → NP_835502.1 histone H2B type 1-F/J/L

Status: PROVISIONAL

Source sequence(s)

AY158935

Consensus CDS

CCDS26350.1

UniProtKB/Swiss-Prot

P10853

Related

ENSMUSP00000100738, OTTMUSP00000000526, ENSMUST00000105106, OTTMUST00000001145

Conserved Domains (1) summary

cl00074
Location:36 – 124
Blast Score: 389

H2A; Histone 2A; H2A is a subunit of the nucleosome. The nucleosome is an octamer containing two H2A, H2B, H3, and H4 subunits. The H2A subunit performs essential roles in maintaining structural integrity of the nucleosome, chromatin condensation, and binding ...

RefSeqs of Annotated Genomes: Build 38.1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38 C57BL/6J

Genomic

NC_000079.6 Reference GRCm38 C57BL/6J

Range

23573810..23574190, complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

AC_000035.1 Alternate Mm_Celera

Range

23805740..23806120, complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

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Related Sequences

Nucleotide		Protein	Strain
Heading	Accession and Version	Protein	Strain
genomic	AC034285.6 (61188..61568)	None
genomic	AY158935.1	AAO06245.1
genomic	U62669.1	AAB04762.1	C57BL/6J
other-genetic	BC160307.1	AAI60307.1