These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
Genomic
-
NG_029577.1 RefSeqGene
- Range
- 5001..17572
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_002140.3 → NP_002131.2 heterogeneous nuclear ribonucleoprotein K isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript. Transcript variants 1 and 2 encode the same isoform (a).
- Source sequence(s)
-
AB209562, BC000355, BU736090, DC407458
- Consensus CDS
-
CCDS6668.1
- UniProtKB/Swiss-Prot
-
P61978
- UniProtKB/TrEMBL
-
Q6IBN1
- Related
- ENSP00000365458, OTTHUMP00000021557, ENST00000376281, OTTHUMT00000052855
- Conserved Domains (2) summary
-
- cd02396
Location:44 – 105
Blast Score: 164
- PCBP_like_KH; K homology RNA-binding domain, PCBP_like. Members of this group possess KH domains in a tandem arrangement. Most members, similar to the poly(C) binding proteins (PCBPs) and Nova, containing three KH domains, with the first and second domains, which are ...
- pfam08067
Location:1 – 43
Blast Score: 142
- ROKNT; ROKNT (NUC014) domain
-
NM_031262.2 → NP_112552.1 heterogeneous nuclear ribonucleoprotein K isoform b
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) uses an alternate acceptor splice site at the last coding exon compared to transcript variant 1. This results in a frame-shift and an isoform (b) with a distinct C-terminus compared to isoform a.
- Source sequence(s)
-
AB209562, BC014980, BU736090, DC407458
- Consensus CDS
-
CCDS6667.1
- UniProtKB/Swiss-Prot
-
P61978
- Related
- ENSP00000365440, ENST00000376264
- Conserved Domains (2) summary
-
- cd02396
Location:44 – 105
Blast Score: 164
- PCBP_like_KH; K homology RNA-binding domain, PCBP_like. Members of this group possess KH domains in a tandem arrangement. Most members, similar to the poly(C) binding proteins (PCBPs) and Nova, containing three KH domains, with the first and second domains, which are ...
- pfam08067
Location:1 – 43
Blast Score: 143
- ROKNT; ROKNT (NUC014) domain
-
NM_031263.2 → NP_112553.1 heterogeneous nuclear ribonucleoprotein K isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate 5' non-coding exon, hence has a different 5' UTR compared to transcript variant 1. Transcript variants 1 and 2 encode the same isoform (a).
- Source sequence(s)
-
AB209562, BC000355, BU736090, DA394419
- Consensus CDS
-
CCDS6668.1
- UniProtKB/Swiss-Prot
-
P61978
- UniProtKB/TrEMBL
-
Q6IBN1
- Related
- ENSP00000365439, ENST00000376263
- Conserved Domains (2) summary
-
- cd02396
Location:44 – 105
Blast Score: 164
- PCBP_like_KH; K homology RNA-binding domain, PCBP_like. Members of this group possess KH domains in a tandem arrangement. Most members, similar to the poly(C) binding proteins (PCBPs) and Nova, containing three KH domains, with the first and second domains, which are ...
- pfam08067
Location:1 – 43
Blast Score: 142
- ROKNT; ROKNT (NUC014) domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p5 Primary Assembly
Genomic
-
NC_000009.11 Reference GRCh37.p5 Primary Assembly
- Range
- 86582998..86595569, complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000141.1 Alternate HuRef
- Range
- 56408631..56421199, complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)