CG16892 [Drosophila melanogaster] - Gene

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Summary

Official Symbol: CG16892provided by Flybase
Primary source: FLYBASE:FBgn0030122
Locus tag: Dmel_CG16892
Gene type: protein coding
RNA name: CG16892
RefSeq status: REVIEWED
Organism: Drosophila melanogaster
Lineage: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as: Dmel\CG16892

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Genomic context

Location :: 8D4-8D4

Sequence :: Chromosome: X; NC_004354.3 (9167450..9169387)

See CG16892 in Epigenomics, MapViewer

Chromosome X - NC_004354.3 Genomic Context describing neighboring genes

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Genomic regions, transcripts, and products

Genomic Sequence

Go to nucleotideGraphics FASTA GenBank

Go to reference sequence details

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Bibliography

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Submit: New GeneRIF Correction

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Interactions

Products	Interactant	Other Gene	Source	Pubs	Description
BioGRID:58330	BioGRID:68567	CycG	BioGRID	PubMed	Two-hybrid
BioGRID:58330	BioGRID:64739	RhoGAP68F	BioGRID	PubMed	Two-hybrid
BioGRID:58330	BioGRID:65629	SAK	BioGRID	PubMed	Two-hybrid
BioGRID:58330	BioGRID:63374	TBPH	BioGRID	PubMed	Two-hybrid
BioGRID:58330	BioGRID:67158	ald	BioGRID	PubMed	Two-hybrid
BioGRID:58330	BioGRID:68673	nej	BioGRID	PubMed	Two-hybrid
BioGRID:58330	BioGRID:58031	rux	BioGRID	PubMed	Two-hybrid

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General gene information

Pathways from BioSystems

Gene Expression, organism-specific biosystem (from REACTOME)
Gene Expression, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Metabolism of non-coding RNA, organism-specific biosystem (from REACTOME)
Metabolism of non-coding RNA, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Nuclear pore complex, organism-specific biosystem (from KEGG)
Nuclear pore complex, organism-specific biosystemStructural complex; Genetic information processing; RNA processing
Processing of Capped Intron-Containing Pre-mRNA, organism-specific biosystem (from REACTOME)
Processing of Capped Intron-Containing Pre-mRNA, organism-specific biosystemcomputationally inferred pathway (not manually curated)
RNA transport, organism-specific biosystem (from KEGG)
RNA transport, organism-specific biosystemRNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) ...
RNA transport, conserved biosystem (from KEGG)
RNA transport, conserved biosystemRNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) ...
Transport of Mature Transcript to Cytoplasm, organism-specific biosystem (from REACTOME)
Transport of Mature Transcript to Cytoplasm, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Transport of Mature mRNA derived from an Intron-Containing Transcript, organism-specific biosystem (from REACTOME)
Transport of Mature mRNA derived from an Intron-Containing Transcript, organism-specific biosystemcomputationally inferred pathway (not manually curated)
snRNP Assembly, organism-specific biosystem (from REACTOME)
snRNP Assembly, organism-specific biosystemcomputationally inferred pathway (not manually curated)

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General protein information

Preferred Names: CG16892 gene product from transcript CG16892-RA

Names: CG16892; CG16892-PA

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NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_004354.3

Range

9167450..9169387

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_132329.3 → NP_572557.1 CG16892 [Drosophila melanogaster]

Status: REVIEWED

UniProtKB/TrEMBL

Q9W351

Related

FBpp0071254, FBtr0071319

Conserved Domains (1) summary

cl02567
Location:137 – 331
Blast Score: 156

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...