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    CG12661 [ Drosophila melanogaster ]

    Gene ID: 31822, updated on 9-May-2012
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    Summary

    Official Symbol
    CG12661provided by Flybase
    Primary source
    FLYBASE:FBgn0030071
    Locus tag
    Dmel_CG12661
    Gene type
    protein coding
    RNA name
    CG12661
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG12661
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    Genomic context

    Location :
    8B8-8B8
    Sequence :
    Chromosome: X; NC_004354.3 (8817256..8817651, complement)
    See CG12661 in Epigenomics, MapViewer

    Chromosome X - NC_004354.3Genomic Context describing neighboring genes Neighboring gene RNA-binding motif protein 13 Neighboring gene enhancer of rudimentary Neighboring gene retinal degeneration A Neighboring gene CG43255 gene product from transcript CG43255-RA Neighboring gene mir-4964 stem loop

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    2. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    3. Joint estimates of quantitative trait locus effect and frequency using synthetic recombinant populations of Drosophila melanogaster. Macdonald SJ, et al. Genetics, 2007 Jun. PMID 17435224.
    4. Genomic organization of gypsy chromatin insulators in Drosophila melanogaster. Ramos E, et al. Genetics, 2006 Apr. PMID 16452134.
    5. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:58279 BioGRID:65722 CG14451    BioGRID  PubMed Two-hybrid 
    BioGRID:58279 BioGRID:68440 CG15529    BioGRID  PubMed Two-hybrid 
    BioGRID:58279 BioGRID:57754 CG2865    BioGRID  PubMed Two-hybrid 
    BioGRID:58279 BioGRID:77525 CG33213    BioGRID  PubMed Two-hybrid 
    BioGRID:58279 BioGRID:64758 CG4328    BioGRID  PubMed Two-hybrid 
    BioGRID:58279 BioGRID:58929 CG9911    BioGRID  PubMed Two-hybrid 
    BioGRID:58279 BioGRID:60772 Drep-4    BioGRID  PubMed Two-hybrid 
    BioGRID:58279 BioGRID:58911 exd    BioGRID  PubMed Two-hybrid 
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    General protein information

    Preferred Names
    CG12661 gene product from transcript CG12661-RA
    Names
    CG12661
    CG12661-PA
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.3

      Range
      8817256..8817651, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_132283.1 → NP_572511.1  CG12661 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W3A7
      Related
      FBpp0071208, FBtr0071265
      Conserved Domains (1) summary
      pfam05811
      Location:9 – 127
      Blast Score: 293
      DUF842; Eukaryotic protein of unknown function (DUF842)
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    mRNA BT128805.1 AEM72501.1
    genomic AE014298.4 AAF46426.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9W3A7.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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