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CG4558 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 31631, updated on 4-Apr-2024

Summary

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Official Symbol
CG4558provided by FlyBase
Primary source
FLYBASE:FBgn0029914
Locus tag
Dmel_CG4558
See related
AllianceGenome:FB:FBgn0029914
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG4558
Summary
Is expressed in organism. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
6D6-6D7; 1-18 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (6849770..6851884)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (6743803..6745917)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene TATA element modulatory factor Neighboring gene Chitinase 11 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45531 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The nonsense-mediated decay pathway maintains synapse architecture and synaptic vesicle cycle efficacy. Long AA, et al. J Cell Sci, 2010 Oct 1. PMID 20826458, Free PMC Article
  2. Cluster-Based Analysis of Retinitis Pigmentosa Modifiers Using Drosophila Eye Size and Gene Expression Data. Amstutz J, et al. Genes (Basel), 2022 Feb 21. PMID 35205430, Free PMC Article
  3. Genome-wide identification and characterization of tissue-specific RNA editing events in D. melanogaster and their potential role in regulating alternative splicing. Mazloomian A, et al. RNA Biol, 2015. PMID 26512413, Free PMC Article
  4. Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome. MacMillan HA, et al. Sci Rep, 2016 Jun 30. PMID 27357258, Free PMC Article
  5. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article

See all (20) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG4558-PA
CG4558-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    6849770..6851884
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_132134.4 → NP_572362.1  uncharacterized protein Dmel_CG4558, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_572362.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q95RD4, Q9W3V0
    Related
    FBpp0070955

  2. NM_001169212.2 → NP_001162683.1  uncharacterized protein Dmel_CG4558, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001162683.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    E1JJF2
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
E1JJF2 E1JJF2
Q9W3V0 Q9W3V0

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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