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    Fos FBJ osteosarcoma oncogene [ Rattus norvegicus (Norway rat) ]

    Gene ID: 314322, updated on 19-May-2013
    Official Symbol
    Fosprovided by RGD
    Official Full Name
    FBJ osteosarcoma oncogeneprovided by RGD
    Primary source
    RGD:2626
    See related
    Ensembl:ENSRNOG00000008015
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus
    Also known as
    c-fos
    Summary
    an immediate early gene encoding a nuclear protein involved in signal transduction [RGD, Feb 2006]
    Location :
    6q31
    Sequence :
    Chromosome: 6; NC_005105.3 (116249742..116252608, complement)
    See Fos in MapViewer

    Chromosome 6 - NC_005105.3Genomic Context describing neighboring genes Neighboring gene actinin, alpha 1 Neighboring gene NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2 Neighboring gene similar to ribosomal protein L21 Neighboring gene ribosomal protein S28-like Neighboring gene transmembrane emp24-like trafficking protein 10 (yeast)

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Products Interactant Other Gene Complex Source Pubs Description
    TVRTFS NP_040842.1 tat    BIND  PubMed The visna virus protein Tat interacts with rat Fos. 
    U02631.1 NP_110487.1 Mef2d    BIND  PubMed SRF interacts with c-fos gene promoter. 
    XP_234422.2 NP_068607.1 Jun    BIND  PubMed Fos interacts with Jun. This interaction was modelled on a demonstrated interaction between Rattus rattus fos and Rattus norvegicus jun. 
    BioGRID:260681 BioGRID:219977 Smarcd1    BioGRID  PubMed Reconstituted Complex 

    Markers

    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    DNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    DNA binding ISO
    Inferred from Sequence Orthology
    more info
     
    R-SMAD binding IEA
    Inferred from Electronic Annotation
    more info
     
    R-SMAD binding ISO
    Inferred from Sequence Orthology
    more info
     
    double-stranded DNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    protein heterodimerization activity IC
    Inferred by Curator
    more info
    PubMed 
    protein heterodimerization activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    protein heterodimerization activity IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    sequence-specific DNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    sequence-specific DNA binding transcription factor activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    sequence-specific DNA binding transcription factor activity ISO
    Inferred from Sequence Orthology
    more info
     
    sequence-specific DNA binding transcription factor activity TAS
    Traceable Author Statement
    more info
    PubMed 
    transcription factor binding IPI
    Inferred from Physical Interaction
    more info
     
    transcription regulatory region DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    transcription regulatory region DNA binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    SMAD protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    SMAD protein signal transduction ISO
    Inferred from Sequence Orthology
    more info
     
    aging IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    cellular response to calcium ion IEA
    Inferred from Electronic Annotation
    more info
     
    cellular response to calcium ion ISO
    Inferred from Sequence Orthology
    more info
     
    cellular response to extracellular stimulus IEA
    Inferred from Electronic Annotation
    more info
     
    cellular response to extracellular stimulus ISO
    Inferred from Sequence Orthology
    more info
     
    cellular response to hormone stimulus IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    cellular response to reactive oxygen species IEA
    Inferred from Electronic Annotation
    more info
     
    cellular response to reactive oxygen species ISO
    Inferred from Sequence Orthology
    more info
     
    conditioned taste aversion IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    female pregnancy IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    nervous system development IEA
    Inferred from Electronic Annotation
    more info
     
    nervous system development ISO
    Inferred from Sequence Orthology
    more info
     
    positive regulation of transcription from RNA polymerase II promoter IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of transcription from RNA polymerase II promoter ISO
    Inferred from Sequence Orthology
    more info
     
    positive regulation of transcription, DNA-dependent ISO
    Inferred from Sequence Orthology
    more info
     
    regulation of transcription, DNA-dependent ISO
    Inferred from Sequence Orthology
    more info
     
    response to cAMP IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    response to cold IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    response to corticosterone stimulus IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    response to cytokine stimulus IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    response to drug IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    response to drug ISO
    Inferred from Sequence Orthology
    more info
     
    response to gravity IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    response to light stimulus IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    response to lipopolysaccharide IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    response to mechanical stimulus IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    response to organic cyclic compound IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    response to progesterone stimulus IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    response to stress IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    response to toxic substance IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    skeletal muscle cell differentiation ISO
    Inferred from Sequence Orthology
    more info
     
    sleep IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    transcription from RNA polymerase II promoter IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    transforming growth factor beta receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    transforming growth factor beta receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    neuron projection IDA
    Inferred from Direct Assay
    more info
    PubMed 
    NOT nucleolus ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus TAS
    Traceable Author Statement
    more info
    PubMed 
    transcription factor complex IEA
    Inferred from Electronic Annotation
    more info
     
    transcription factor complex ISO
    Inferred from Sequence Orthology
    more info
     
    Preferred Names
    proto-oncogene c-Fos
    Names
    proto-oncogene c-Fos
    c-fos oncogene
    proto-oncogene cFOS
    FBJ murine osteosarcoma viral oncogene homolog
    v-fos FBJ murine osteosarcoma viral oncogene homolog

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_022197.2NP_071533.1  proto-oncogene c-Fos

      Status: PROVISIONAL

      Source sequence(s)
      DQ089699
      UniProtKB/Swiss-Prot
      P12841
      Related
      ENSRNOP00000010712, ENSRNOT00000010712
      Conserved Domains (1) summary
      smart00338
      Location:147185
      Blast Score: 131
      BRLZ; basic region leucin zipper

    RefSeqs of Annotated Genomes: Build 5.1

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Rnor_5.0 Primary Assembly

    Genomic

    1. NC_005105.3 Reference Rnor_5.0 Primary Assembly

      Range
      116249742..116252608, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Rn_Celera

    Genomic

    1. AC_000074.1 Alternate Rn_Celera

      Range
      102942464..102945330
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

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